| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812010
Identifier: 237812010
GI number: 237812010
Start: 1696985
End: 1697542
Strand: Reverse
Name: 237812010
Synonym: GBP346_A1750
Alternate gene names: NA
Gene position: 1697542-1696985 (Counterclockwise)
Preceding gene: 237812015
Following gene: 237812009
Centisome position: 41.42
GC content: 73.3
Gene sequence:
>558_bases ATGCCCGCCCTCTTTCGCCGACGCCCGCTTGCCGCGATCCGCGCCGCGGCGGCGCTGTCGCTCGCGGCGACACTCGCGCC CGCGCACGCCGATACGACCGGCCTGATCGAGCCCGCGCACCTGAGCGTCGACGGCAGCCTGCCCGCGGCGCAGCGCGACG CGCAGATCCTCGCCGCGCGCCGCTACGACACGTTCTGGCACAACGGCGATCCGGCGCTTGCGCGCGCCGCGCTCGCCGAC GATTTCGCCGACCGCACGCCGCCGCCCGGCCGCGCGCCCGGCCTGGCCGGCCCGCTCGCCGCGTCGCGGACGATGCGCGC GGCGATCCCCGATCTGTCGTGCGAGATCGAGCAGATGATCGTCGCGGGCGAGCGCGTCGTCGTGCATCTGCGCTTTCGCG GGCACTTCACCGGCAGGTTCGGGCCCGTGCAAGGCAAAGGCCAGGCGATCGACTTCATCGCGACCGACATCTATCGCATC GAGCGCGGCCGGATCGCCGAGAACTGGCACATCGAAGACAACCTGACGCTGCTGCGCGAGCTCGGCATCGCCGCCTGA
Upstream 100 bases:
>100_bases AACTAACATGAATGCCGCCGCCGTACGAACGAGGCGGACGACATTCCGCGCGATCGCCGTCAGGCATCGCGCGCCACGCA ACGCACACAAGGAGATTCCG
Downstream 100 bases:
>100_bases CGAAGGGAACGCGCATGACGACCAACATGTCCGACGCGGCCGGCGCACCGGCCGCTTCATTCGCGCCCGAGCGGCGCGCG TTCCTGGCCCGTGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALAD DFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRI ERGRIAENWHIEDNLTLLRELGIAA
Sequences:
>Translated_185_residues MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALAD DFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRI ERGRIAENWHIEDNLTLLRELGIAA >Mature_184_residues PALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAARRYDTFWHNGDPALARAALADD FADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMIVAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIE RGRIAENWHIEDNLTLLRELGIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19897; Mature: 19766
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAAR CCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RYDTFWHNGDPALARAALADDFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMI HCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIERGRIAENWHIEDNLTLLRE HCCCEEEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEECCCHHHHHH LGIAA CCCCC >Mature Secondary Structure PALFRRRPLAAIRAAAALSLAATLAPAHADTTGLIEPAHLSVDGSLPAAQRDAQILAAR CCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH RYDTFWHNGDPALARAALADDFADRTPPPGRAPGLAGPLAASRTMRAAIPDLSCEIEQMI HCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VAGERVVVHLRFRGHFTGRFGPVQGKGQAIDFIATDIYRIERGRIAENWHIEDNLTLLRE HCCCEEEEEEEECCEECCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEECCCHHHHHH LGIAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA