| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237812000
Identifier: 237812000
GI number: 237812000
Start: 1687123
End: 1688196
Strand: Reverse
Name: 237812000
Synonym: GBP346_A1740
Alternate gene names: NA
Gene position: 1688196-1687123 (Counterclockwise)
Preceding gene: 237812002
Following gene: 237811997
Centisome position: 41.19
GC content: 67.13
Gene sequence:
>1074_bases ATGGCAAAATTAGCAGCTTCAAATCAATTCGGCATTCCCAATCAGACCGACGTATTTGCCGTTGACGGCAACGGCTCGCT GCGCGTTTCCTGGGTGGTCAGCGCCGGCGCCTGGAACGGCCCCGCTCAGATCGGGCCGGCGGGGCTCTTCCCGTCCCGCG CGGCGGTTGCGTCGTCGAACCAATTCGGCATCCCGAATCAGACCGACGTGTTCGCCGTCGGCCGCGACGGCGCGCTGAAC GTCGCGTGGGTGGTCAGCGCCGATCGCTGGAACGGACCGACCCCGATCAGCGCCGCGGGCCTTTTCCCGGCCGGCGCGGC GATCGCGGCGTCGAACCAGTTCGGCATCCCGAATCAGACCGACGTGTTTGCCGTGAGCGACAGCGGCGCGTTGAACGTGG CGTGGGTCGTCAGCGCCGAGCGCTGGAACGGACCGATTCCGATCAGCGCGGCGGGCCACTTCCCGGCGGGCGCGCCGCTC GCGACATCGAACCAGTTCGGCATCCCGAATCAGACTGACGTGTTCGTCGTCGACAATAAAGGCGCGTTGAACGTGGCATG GGTTGTCGGCGCCGGCAGTTGGAACGGCCCGATTCCGATCAGCCCTCCCGGGCTGTTCCCTCCCGGCGCGGCGGTCGCCG CATCGAACCAGTTCGGCATTCCGAATCAGACCGACGTGTTCGTCGTCGACAACCAGGGCGCGTTGAACGTCGCCTGGGTC GTCGGCGCGGATCGCTGGAACGGGCCGGTTCCGATCAGCCCTGCCGGGCTCTTCCCGCCCGGCGCGGCGGTTGCGGCATC GAACCAGTTCGGTATCCCGAACCAGACCGACGTGTTTGCCGTCGGCCGCGACGGCGCACTACGCGTTGCCTGGGTGGTCA GCGCCGGCAATTGGAACGGCCCCGTGTCGATCAGCCCGACGAACCTTTTCCCGTCCGGCGCGGCGGTTGCGGCATCGAAC CAGTTCGGCATCCCGAATCAGACCGACGTGTTCGCCGCCGATAGCGACGGCGTCCTGCACGTCGCGTGGGTGGTCAGCGC CGGCAATTGGAACGGGCCGATTTCCATTGCGTGA
Upstream 100 bases:
>100_bases CCCACCAAACACGCAAAGGAGGCCAAATCGCCCATTACTTAACAAACCCTGTTTAAGAATTCAATAAATGCCTTTCCACC TATCGAAAAGGTGAAACAAA
Downstream 100 bases:
>100_bases CGCCCGCGCCCGGCCGTCGCGTCCGCGAGCGACATCGCGACGCGTGTTCCCGCTCGCGTCCGGCTCCTGCTCCGCAAGCT GACGCGCGTCCGCGCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAKLAASNQFGIPNQTDVFAVDGNGSLRVSWVVSAGAWNGPAQIGPAGLFPSRAAVASSNQFGIPNQTDVFAVGRDGALN VAWVVSADRWNGPTPISAAGLFPAGAAIAASNQFGIPNQTDVFAVSDSGALNVAWVVSAERWNGPIPISAAGHFPAGAPL ATSNQFGIPNQTDVFVVDNKGALNVAWVVGAGSWNGPIPISPPGLFPPGAAVAASNQFGIPNQTDVFVVDNQGALNVAWV VGADRWNGPVPISPAGLFPPGAAVAASNQFGIPNQTDVFAVGRDGALRVAWVVSAGNWNGPVSISPTNLFPSGAAVAASN QFGIPNQTDVFAADSDGVLHVAWVVSAGNWNGPISIA
Sequences:
>Translated_357_residues MAKLAASNQFGIPNQTDVFAVDGNGSLRVSWVVSAGAWNGPAQIGPAGLFPSRAAVASSNQFGIPNQTDVFAVGRDGALN VAWVVSADRWNGPTPISAAGLFPAGAAIAASNQFGIPNQTDVFAVSDSGALNVAWVVSAERWNGPIPISAAGHFPAGAPL ATSNQFGIPNQTDVFVVDNKGALNVAWVVGAGSWNGPIPISPPGLFPPGAAVAASNQFGIPNQTDVFVVDNQGALNVAWV VGADRWNGPVPISPAGLFPPGAAVAASNQFGIPNQTDVFAVGRDGALRVAWVVSAGNWNGPVSISPTNLFPSGAAVAASN QFGIPNQTDVFAADSDGVLHVAWVVSAGNWNGPISIA >Mature_356_residues AKLAASNQFGIPNQTDVFAVDGNGSLRVSWVVSAGAWNGPAQIGPAGLFPSRAAVASSNQFGIPNQTDVFAVGRDGALNV AWVVSADRWNGPTPISAAGLFPAGAAIAASNQFGIPNQTDVFAVSDSGALNVAWVVSAERWNGPIPISAAGHFPAGAPLA TSNQFGIPNQTDVFVVDNKGALNVAWVVGAGSWNGPIPISPPGLFPPGAAVAASNQFGIPNQTDVFVVDNQGALNVAWVV GADRWNGPVPISPAGLFPPGAAVAASNQFGIPNQTDVFAVGRDGALRVAWVVSAGNWNGPVSISPTNLFPSGAAVAASNQ FGIPNQTDVFAADSDGVLHVAWVVSAGNWNGPISIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36126; Mature: 35995
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLAASNQFGIPNQTDVFAVDGNGSLRVSWVVSAGAWNGPAQIGPAGLFPSRAAVASSN CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC QFGIPNQTDVFAVGRDGALNVAWVVSADRWNGPTPISAAGLFPAGAAIAASNQFGIPNQT CCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC DVFAVSDSGALNVAWVVSAERWNGPIPISAAGHFPAGAPLATSNQFGIPNQTDVFVVDNK EEEEEECCCCEEEEEEEEEHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEEEEECC GALNVAWVVGAGSWNGPIPISPPGLFPPGAAVAASNQFGIPNQTDVFVVDNQGALNVAWV CCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEE VGADRWNGPVPISPAGLFPPGAAVAASNQFGIPNQTDVFAVGRDGALRVAWVVSAGNWNG EECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC PVSISPTNLFPSGAAVAASNQFGIPNQTDVFAADSDGVLHVAWVVSAGNWNGPISIA CEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEEC >Mature Secondary Structure AKLAASNQFGIPNQTDVFAVDGNGSLRVSWVVSAGAWNGPAQIGPAGLFPSRAAVASSN CCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCC QFGIPNQTDVFAVGRDGALNVAWVVSADRWNGPTPISAAGLFPAGAAIAASNQFGIPNQT CCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC DVFAVSDSGALNVAWVVSAERWNGPIPISAAGHFPAGAPLATSNQFGIPNQTDVFVVDNK EEEEEECCCCEEEEEEEEEHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEEEEECC GALNVAWVVGAGSWNGPIPISPPGLFPPGAAVAASNQFGIPNQTDVFVVDNQGALNVAWV CCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEEE VGADRWNGPVPISPAGLFPPGAAVAASNQFGIPNQTDVFAVGRDGALRVAWVVSAGNWNG EECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC PVSISPTNLFPSGAAVAASNQFGIPNQTDVFAADSDGVLHVAWVVSAGNWNGPISIA CEEECCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA