| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is fusA [H]
Identifier: 237811983
GI number: 237811983
Start: 1670602
End: 1672461
Strand: Reverse
Name: fusA [H]
Synonym: GBP346_A1723
Alternate gene names: 237811983
Gene position: 1672461-1670602 (Counterclockwise)
Preceding gene: 237811986
Following gene: 237811982
Centisome position: 40.81
GC content: 71.61
Gene sequence:
>1860_bases TTGCACCATTCTCGGTTTATTCGGCAATCCGCAAAAAAATATAATCGCATCGACTCATCTTTATCCGAAAGGGAGAAAAT CGTGCAGTCTCCGGCAATGAGAGGGACGCTTGCACTCGCGGTTCTTGCAATCTCATTAATAATGGCCGGATGCGCAAGCA TGGGCGATGTTGCACCGCAAGACAAGCAGGTCGATCCGGCGTCGCTCGACGCGGGCGCGGCGATCGCGGCGGCCGAGCGC GACGCCGGCTGGCCCGCGGCCGACTGGTGGCGCGCGTATCGCGATCCGCAGCTCGATTCGTGGATCGCCGCGTCGCTCGC CGGCAACCCTTCGCTCGCCGCCGCGCAGGCCCGCGTGCGCGAGGCGCAGTCGCTCGCGCGCATCGCGCACGCCGAGGAGC TGCCGCAGTTGAACGGCAACCTGTCGCTGATGCGCCAGCACTGGCCGGACAACGTCTATTACGGCCCGGGCCCGCTCGCG AACGCCGACACGTGGAACAACACGGGCACGCTGAGCCTGTCGTACCACCTCGATCTGTGGGGCAAGGACAAGCACAACGC CGAGCGCGCGCTCGACGCGGCGCGCGCCCGCGCGGCCGACGCGCGTGCCGCGCAGCTCGAGCTCGAGGCGAACGTCGTGC GCGCGTACGTCGATTTCGCGAAGAACTACGCGCTCCTCGACATCGCGCACGCGACCTACGAGCGCCAGAACGCGCTCGCC GAACTGGCGCGCAAGCGCCTGCGCGCGGGCATCGGCACGCAACTCGAGGTGAGCCAGGCCGAGGCGCCGCTGCCCGATTA TTCGCGGCAGATCAACTCGTATGAAGAGGCGATCCAGCTCGGCCGTCACCAGCTCGCCGCGCTCGCGGGCAAGGGGCCGG GCGCGGGCGCCTCGCTCGCGCGGCCGAAGCTCGCGCTCGACGCGAACGCCGCCCTGCCGTCCGCGCTGCCCGCCGAGCTG CTCGGCCGCCGGCCGGACATCGTCGCCGCGCGCTGGATGGTCGACGCGCAGGCGCGCGGCATCGACGTCGCGAAGGCCGC GTTCTATCCGAACGTCGACCTGATCGCGTCGCTCGGCGGCTTCGCGGTCAGCGCGCCGTTCGCGACGTTCCTGCGCGCGA TGAACGGCGGCTGGTCGGCCGGCCCCGCGCTCACGCTGCCGATCTTCGAGGGCGGCCGGCTGCGCGCGCAACTGGGCGTC GCGTCGGCGGGCTACGACCAGGCGGTCGAGCACTACAACCAGACGATCGTCGGCGCGCTGAAGGACATCGCCGACAACGT CGTGCGCCTGCATTCGCTCGATTCGCAGCAAAAGGACGCGGCGCGCGCGGTCTCGCTCACGCGGCGCTCGTACGATCTGT CGCATGCGGGCTTCAGCCGCGGGCTCACCGATTACGTGAACGTGCTCATCGCGCAGAGCCAGTTGCTGACCGCGCAGGAG AACCAGACACGCATCGAGGCCGCGCGCCTCGCCGCGCACGCGTCGCTGATGGTCGCGCTCGGCGGCGGGCTCGAAACCGG GCACGACGCGCCCGCGGGCGACGCGCGGCGGACGGGTGCTTCGGGTGCTTCGGGTGCTTCGGGTGCTTCGGGTGCTTCGG GCGCTTCGGGCGCTTCGGGTGCTTCAGGCGCTTCAGGCACCGCGGGCGCTTCGGCCACCGCATCCGCGTCGGCCGCCGGC CACGCGCCGGCTGGCGCCGCTGCTCCGGCATCGCCCGCCGGCATCCGCGCGGCCGCCAGCGCTCGCGCGTCAATGCCGGC TCCCGCCGCGGCGGCGACCGCGCCCGCCTTCGCGTCGCCCGTCGCCGGCGCCTCGACGCCGATGCCCGCTGCGACAGCGG CGGCCCGCGCCGCCCGCTAA
Upstream 100 bases:
>100_bases GCGCATGTTTTGGAGCGTATCCATGCTATTTCCCTATTGAATCCGGGAGGATTGTTGCACAAACATCCAACAATATTATC TCAATGTCCGTAAGAATGCG
Downstream 100 bases:
>100_bases TCAAGGAGCCGATCTCATGCCAGCCGCGTCCCCCCCTTCCGCTGCGACGCCGCAATCGGCGGGCGCCGCCTTCGTCGCGT CGATGAGCGACTGGGCTCGC
Product: RND efflux system, outer membrane lipoprotein, NodT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MHHSRFIRQSAKKYNRIDSSLSEREKIVQSPAMRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAER DAGWPAADWWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLA NADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALA ELARKRLRAGIGTQLEVSQAEAPLPDYSRQINSYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAEL LGRRPDIVAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGV ASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQE NQTRIEAARLAAHASLMVALGGGLETGHDAPAGDARRTGASGASGASGASGASGASGASGASGASGTAGASATASASAAG HAPAGAAAPASPAGIRAAASARASMPAPAAAATAPAFASPVAGASTPMPAATAAARAAR
Sequences:
>Translated_619_residues MHHSRFIRQSAKKYNRIDSSLSEREKIVQSPAMRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAER DAGWPAADWWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLA NADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALA ELARKRLRAGIGTQLEVSQAEAPLPDYSRQINSYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAEL LGRRPDIVAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGV ASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQE NQTRIEAARLAAHASLMVALGGGLETGHDAPAGDARRTGASGASGASGASGASGASGASGASGASGTAGASATASASAAG HAPAGAAAPASPAGIRAAASARASMPAPAAAATAPAFASPVAGASTPMPAATAAARAAR >Mature_619_residues MHHSRFIRQSAKKYNRIDSSLSEREKIVQSPAMRGTLALAVLAISLIMAGCASMGDVAPQDKQVDPASLDAGAAIAAAER DAGWPAADWWRAYRDPQLDSWIAASLAGNPSLAAAQARVREAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLA NADTWNNTGTLSLSYHLDLWGKDKHNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALA ELARKRLRAGIGTQLEVSQAEAPLPDYSRQINSYEEAIQLGRHQLAALAGKGPGAGASLARPKLALDANAALPSALPAEL LGRRPDIVAARWMVDAQARGIDVAKAAFYPNVDLIASLGGFAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGV ASAGYDQAVEHYNQTIVGALKDIADNVVRLHSLDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQE NQTRIEAARLAAHASLMVALGGGLETGHDAPAGDARRTGASGASGASGASGASGASGASGASGASGTAGASATASASAAG HAPAGAAAPASPAGIRAAASARASMPAPAAAATAPAFASPVAGASTPMPAATAAARAAR
Specific function: Involved in the resistance (detoxification) of the fungal toxin fusaric acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=479, Percent_Identity=30.062630480167, Blast_Score=189, Evalue=4e-49, Organism=Escherichia coli, GI1786785, Length=480, Percent_Identity=28.5416666666667, Blast_Score=137, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 63681; Mature: 63681
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHSRFIRQSAKKYNRIDSSLSEREKIVQSPAMRGTLALAVLAISLIMAGCASMGDVAPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DKQVDPASLDAGAAIAAAERDAGWPAADWWRAYRDPQLDSWIAASLAGNPSLAAAQARVR CCCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH EAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLANADTWNNTGTLSLSYHLDLW HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEC GKDKHNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHH ELARKRLRAGIGTQLEVSQAEAPLPDYSRQINSYEEAIQLGRHQLAALAGKGPGAGASLA HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPKLALDANAALPSALPAELLGRRPDIVAARWMVDAQARGIDVAKAAFYPNVDLIASLGG CCCEEECCCCCCCCCCCHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCC FAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGAL HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH KDIADNVVRLHSLDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC NQTRIEAARLAAHASLMVALGGGLETGHDAPAGDARRTGASGASGASGASGASGASGASG CHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC ASGASGTAGASATASASAAGHAPAGAAAPASPAGIRAAASARASMPAPAAAATAPAFASP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHCC VAGASTPMPAATAAARAAR CCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MHHSRFIRQSAKKYNRIDSSLSEREKIVQSPAMRGTLALAVLAISLIMAGCASMGDVAPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC DKQVDPASLDAGAAIAAAERDAGWPAADWWRAYRDPQLDSWIAASLAGNPSLAAAQARVR CCCCCCCCCCCCCHHEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH EAQSLARIAHAEELPQLNGNLSLMRQHWPDNVYYGPGPLANADTWNNTGTLSLSYHLDLW HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEEC GKDKHNAERALDAARARAADARAAQLELEANVVRAYVDFAKNYALLDIAHATYERQNALA CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHH ELARKRLRAGIGTQLEVSQAEAPLPDYSRQINSYEEAIQLGRHQLAALAGKGPGAGASLA HHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RPKLALDANAALPSALPAELLGRRPDIVAARWMVDAQARGIDVAKAAFYPNVDLIASLGG CCCEEECCCCCCCCCCCHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCC FAVSAPFATFLRAMNGGWSAGPALTLPIFEGGRLRAQLGVASAGYDQAVEHYNQTIVGAL HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHH KDIADNVVRLHSLDSQQKDAARAVSLTRRSYDLSHAGFSRGLTDYVNVLIAQSQLLTAQE HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHCC NQTRIEAARLAAHASLMVALGGGLETGHDAPAGDARRTGASGASGASGASGASGASGASG CHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC ASGASGTAGASATASASAAGHAPAGAAAPASPAGIRAAASARASMPAPAAAATAPAFASP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCHHHCC VAGASTPMPAATAAARAAR CCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1370369 [H]