| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is mocC [H]
Identifier: 237811958
GI number: 237811958
Start: 1638256
End: 1639176
Strand: Reverse
Name: mocC [H]
Synonym: GBP346_A1698
Alternate gene names: 237811958
Gene position: 1639176-1638256 (Counterclockwise)
Preceding gene: 237811959
Following gene: 237811957
Centisome position: 39.99
GC content: 70.14
Gene sequence:
>921_bases ATGAGCGCACCCGACATCCGTATCGGCATCAACCCGCTGTCGTGGATGAACGACGATCTGCCGTCGCTCGGCGGCGAGAC GCCGCTCGCCGTCGCGCTGACCGAGGGCCGCGAGATCGGCTACGAGGGCTTCGAGCTCGGCAACAAGTTTCCGCGCGAGC CGCAGGCGCTGAAGGCGCTCCTCGCGCAGTACGACCTGTCGCTCGTGTCCGGCTGGTATTCGGGCCGGCTCGCCGAGCGC GGCGTGCAGGAGGAGATCGACGCGGTCGGCCCGCATCTGGAATTGCTCGCGAAGAACGGCGCGACGGTGATGGTCTACGG CGAAGTGGCCGGCACGATCCAGGGCTCGCCCGCGCCGCTCTACCAGCGCCCGCGCTTCGTCGACGACGCGCAATGGGACG CGTACGCCGAGCGCATCGACGCGTTCGCGCGCTACACGCGCGCGCAAGGCGTGCGGCTCGGCTATCACCATCACATGGGC GCGTACGTCGAATCCCCCGCCGACGTCGACCGCCTGATGGCGAGCACGAGCGACGCGGTGGGCCTGCTGTTCGACGCCGG CCACATGACGTTCGGCGGCGGCGACCCGGTGGCCGAGCTCGCGAAGCACATCGGCCGCGTGTGCCATGTTCACTGCAAGG ACGTGCGCCCGGCCGTGATCCGGCTCGCGCGCAACCGCAACTGGAGCTTTCTCGACGCGGTGATCGCGGGCGCGTTCACC GTGCCGGGCGACGGCTCGATCGATTTCCCGACGATCGTCGACATGCTCAAGCGCCACGGCTACCGCGGCTGGCTCGTCGT CGAGGCCGAGCAGGACCCGGCCGTCGCGCCGAGCTACGCGTATGCGCAAAAGGGCTATCGGACGCTGCGCGCGCTCGTCG ACGCGCCGCTCCCGCCCGTCGGTCACAAGGAGGCGGCGTAA
Upstream 100 bases:
>100_bases ACGCGGTGCGCGACGCGCGCGCGGATTACGAACGGCACCTCGCCGCGCGCGCAGGCGCTCCCGCCTCTCGTTCAACCCCC TCTACTCCGGAATCATCGAC
Downstream 100 bases:
>100_bases TGAGTCTGCTCGTCAAGGGCGCGGGCGACGGCATGTCGATCGCGCGCATCACGCCGGAATCGGCGCACTGGAAACACGTC GGCTTCGCCGCGTACCGGCT
Product: IolE protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSAPDIRIGINPLSWMNDDLPSLGGETPLAVALTEGREIGYEGFELGNKFPREPQALKALLAQYDLSLVSGWYSGRLAER GVQEEIDAVGPHLELLAKNGATVMVYGEVAGTIQGSPAPLYQRPRFVDDAQWDAYAERIDAFARYTRAQGVRLGYHHHMG AYVESPADVDRLMASTSDAVGLLFDAGHMTFGGGDPVAELAKHIGRVCHVHCKDVRPAVIRLARNRNWSFLDAVIAGAFT VPGDGSIDFPTIVDMLKRHGYRGWLVVEAEQDPAVAPSYAYAQKGYRTLRALVDAPLPPVGHKEAA
Sequences:
>Translated_306_residues MSAPDIRIGINPLSWMNDDLPSLGGETPLAVALTEGREIGYEGFELGNKFPREPQALKALLAQYDLSLVSGWYSGRLAER GVQEEIDAVGPHLELLAKNGATVMVYGEVAGTIQGSPAPLYQRPRFVDDAQWDAYAERIDAFARYTRAQGVRLGYHHHMG AYVESPADVDRLMASTSDAVGLLFDAGHMTFGGGDPVAELAKHIGRVCHVHCKDVRPAVIRLARNRNWSFLDAVIAGAFT VPGDGSIDFPTIVDMLKRHGYRGWLVVEAEQDPAVAPSYAYAQKGYRTLRALVDAPLPPVGHKEAA >Mature_305_residues SAPDIRIGINPLSWMNDDLPSLGGETPLAVALTEGREIGYEGFELGNKFPREPQALKALLAQYDLSLVSGWYSGRLAERG VQEEIDAVGPHLELLAKNGATVMVYGEVAGTIQGSPAPLYQRPRFVDDAQWDAYAERIDAFARYTRAQGVRLGYHHHMGA YVESPADVDRLMASTSDAVGLLFDAGHMTFGGGDPVAELAKHIGRVCHVHCKDVRPAVIRLARNRNWSFLDAVIAGAFTV PGDGSIDFPTIVDMLKRHGYRGWLVVEAEQDPAVAPSYAYAQKGYRTLRALVDAPLPPVGHKEAA
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33277; Mature: 33146
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDIRIGINPLSWMNDDLPSLGGETPLAVALTEGREIGYEGFELGNKFPREPQALKAL CCCCCEEECCCCHHHCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHH LAQYDLSLVSGWYSGRLAERGVQEEIDAVGPHLELLAKNGATVMVYGEVAGTIQGSPAPL HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC YQRPRFVDDAQWDAYAERIDAFARYTRAQGVRLGYHHHMGAYVESPADVDRLMASTSDAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHCCCCHHCCHHHHHHHHHCCCCCE GLLFDAGHMTFGGGDPVAELAKHIGRVCHVHCKDVRPAVIRLARNRNWSFLDAVIAGAFT EEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEE VPGDGSIDFPTIVDMLKRHGYRGWLVVEAEQDPAVAPSYAYAQKGYRTLRALVDAPLPPV CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GHKEAA CCCCCC >Mature Secondary Structure SAPDIRIGINPLSWMNDDLPSLGGETPLAVALTEGREIGYEGFELGNKFPREPQALKAL CCCCEEECCCCHHHCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHH LAQYDLSLVSGWYSGRLAERGVQEEIDAVGPHLELLAKNGATVMVYGEVAGTIQGSPAPL HHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC YQRPRFVDDAQWDAYAERIDAFARYTRAQGVRLGYHHHMGAYVESPADVDRLMASTSDAV CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECHHHCCCCHHCCHHHHHHHHHCCCCCE GLLFDAGHMTFGGGDPVAELAKHIGRVCHVHCKDVRPAVIRLARNRNWSFLDAVIAGAFT EEEEECCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEE VPGDGSIDFPTIVDMLKRHGYRGWLVVEAEQDPAVAPSYAYAQKGYRTLRALVDAPLPPV CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GHKEAA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]