| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is acpA_1 [H]
Identifier: 237811933
GI number: 237811933
Start: 1609040
End: 1610623
Strand: Reverse
Name: acpA_1 [H]
Synonym: GBP346_A1673
Alternate gene names: 237811933
Gene position: 1610623-1609040 (Counterclockwise)
Preceding gene: 237811935
Following gene: 237811932
Centisome position: 39.3
GC content: 67.74
Gene sequence:
>1584_bases ATGAACAAGCATTGGATTCGCGTGAGCCCGATCGCGCTCGCGGCCGCGATCGGCCTCACCGCGTGCGGCGGGGACGACGT CACGTCGCCCGGCCTGTCCGCCGTCAAGAACGTCGTCGTGATCTATGCCGAAAACCGCAGCTTCGACAACCTGTACGGCA ACTTCCCGGGCGCGAACGGCCTGCAGAACGTGACGGCCGCGAGCGCGGCGCAGGTCGACCGCGACGGCACGCCGCTCGCG ACGCTGCCGAAGATCTGGGGCGGGCTGACCGCGGCGGGCGTGACGCCCGCGGTGACGGAAGCGATGACGGCGAACCTGCC GAACGCGCCGTTCGCGATCGACGATCCGAACGGCTTCAACACGCCGATGAGCGTGACGACGCGCGACCTCGTGCACCGCT TCTACGAAAACCAGATGCAGATCGACGGCGGCAAGAACGACAAGTACGCCGCGTGGAGCGATGCGGGCGGCCTCGTGATG GGCCACTACACCGCCGATCCGTCGAAGCTGCCGCTCTGGAAGCTCGCGCAGCAATACACGCTCGCCGACAACTTCTTCAT GGGCACGTTCGGCGGCTCGTTCCTGAACCATCAGTACCTGATCTGCGCGTGCGCACCGTTCTATCCGAACGCCGACAAGA GCCCGGCCGCGAGCCAGATCTCGGTCGTCAATCCGGACGGCGTGACGCTCACCACCGCGTCGAACTCGCCCGCCTCCGCG CTGTCGGGCCCGCCGAAGTTCGTGAAGTCGGGCGGCCTCACGCCGGACTTCTACGCGGTCAACACGATGCAGCCGCCGTA TCAGCCGAGCGCCAACGCGGCGCCGACGGGCGGCGATCCGAATCTCGCCGATCCGGCGAACCCGTCGACGCTGCCGCCGC AGACGCAGCAGAACATCGGCGATCTGCTCACGAGCGCGGGCGTTTCGTGGGCGTGGTACGCGGGCGCGTGGGGCGCGGCG CTGCAGGCCGCGCAAAGCGGCACGTCGGGCGTGATCTACGGCCCGAACATGACTTCGCCGAACTTCCAGCCGCATCACCA GCCGTTCAACTACTACGCGAACCAGGCGCCCGGCAGCGCGAACCGCGCGCAGCACCTGCTCGACGCGGGCTCGAACGGCG CGGCCCTCATCCAGGCAATCGACGCGGGCAAGCTGCCGCAGGTCACGTTCTACAAGCCGCAGGGCAATCTGAACGAGCAC CCGGGCTACACGGATGTCGCCTCGGGCGACCAGCACATCGCCGACGTGATCGCGCATCTGCAGAAAAGCCCGCAGTGGAA CAACATGGTCGTGATCGTCACGTACGACGAGAACGGCGGGTTCTGGGATCACGTCGCGCCGCCGAAGGGCGACCGCTGGG GTCCGGGCACGCGCATTCCGGCGTTCGTCATCTCGCCGTTCGCGAAACAGGGCTTCGTCGACCACACGCAGTACGACACC GCGTCGATCCTGCGCTTCATCACGCGCCGCTTCGCGCTGCCGAAGCTCGCGGGCCTCAAGCAGCGCGACGACGCGCTCGT CGCGAACGGTTTCAAGCCGATGGGCGACCTGACGAACGCGCTCACGCTGTCGACCGGCAACTGA
Upstream 100 bases:
>100_bases CCGGCTGTCAATGGACATTCACACGACGCGCCGCCTCGCGCGACACGCGCCGGCCGGCCCCTCGATACCCACACACCTCG TGCGACAAGAGAGACAACGA
Downstream 100 bases:
>100_bases GCGCGCGGCCGGCTCACGAACGCAGCATCGCTTCTTTCGGGCGGCTTCGGCCGCCCTTTTTCTATCGTCCGCGGGCCGCG CGCGACGCAGGATCGCGCGG
Product: acid phosphatase AcpA
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MNKHWIRVSPIALAAAIGLTACGGDDVTSPGLSAVKNVVVIYAENRSFDNLYGNFPGANGLQNVTAASAAQVDRDGTPLA TLPKIWGGLTAAGVTPAVTEAMTANLPNAPFAIDDPNGFNTPMSVTTRDLVHRFYENQMQIDGGKNDKYAAWSDAGGLVM GHYTADPSKLPLWKLAQQYTLADNFFMGTFGGSFLNHQYLICACAPFYPNADKSPAASQISVVNPDGVTLTTASNSPASA LSGPPKFVKSGGLTPDFYAVNTMQPPYQPSANAAPTGGDPNLADPANPSTLPPQTQQNIGDLLTSAGVSWAWYAGAWGAA LQAAQSGTSGVIYGPNMTSPNFQPHHQPFNYYANQAPGSANRAQHLLDAGSNGAALIQAIDAGKLPQVTFYKPQGNLNEH PGYTDVASGDQHIADVIAHLQKSPQWNNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAFVISPFAKQGFVDHTQYDT ASILRFITRRFALPKLAGLKQRDDALVANGFKPMGDLTNALTLSTGN
Sequences:
>Translated_527_residues MNKHWIRVSPIALAAAIGLTACGGDDVTSPGLSAVKNVVVIYAENRSFDNLYGNFPGANGLQNVTAASAAQVDRDGTPLA TLPKIWGGLTAAGVTPAVTEAMTANLPNAPFAIDDPNGFNTPMSVTTRDLVHRFYENQMQIDGGKNDKYAAWSDAGGLVM GHYTADPSKLPLWKLAQQYTLADNFFMGTFGGSFLNHQYLICACAPFYPNADKSPAASQISVVNPDGVTLTTASNSPASA LSGPPKFVKSGGLTPDFYAVNTMQPPYQPSANAAPTGGDPNLADPANPSTLPPQTQQNIGDLLTSAGVSWAWYAGAWGAA LQAAQSGTSGVIYGPNMTSPNFQPHHQPFNYYANQAPGSANRAQHLLDAGSNGAALIQAIDAGKLPQVTFYKPQGNLNEH PGYTDVASGDQHIADVIAHLQKSPQWNNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAFVISPFAKQGFVDHTQYDT ASILRFITRRFALPKLAGLKQRDDALVANGFKPMGDLTNALTLSTGN >Mature_527_residues MNKHWIRVSPIALAAAIGLTACGGDDVTSPGLSAVKNVVVIYAENRSFDNLYGNFPGANGLQNVTAASAAQVDRDGTPLA TLPKIWGGLTAAGVTPAVTEAMTANLPNAPFAIDDPNGFNTPMSVTTRDLVHRFYENQMQIDGGKNDKYAAWSDAGGLVM GHYTADPSKLPLWKLAQQYTLADNFFMGTFGGSFLNHQYLICACAPFYPNADKSPAASQISVVNPDGVTLTTASNSPASA LSGPPKFVKSGGLTPDFYAVNTMQPPYQPSANAAPTGGDPNLADPANPSTLPPQTQQNIGDLLTSAGVSWAWYAGAWGAA LQAAQSGTSGVIYGPNMTSPNFQPHHQPFNYYANQAPGSANRAQHLLDAGSNGAALIQAIDAGKLPQVTFYKPQGNLNEH PGYTDVASGDQHIADVIAHLQKSPQWNNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAFVISPFAKQGFVDHTQYDT ASILRFITRRFALPKLAGLKQRDDALVANGFKPMGDLTNALTLSTGN
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 55759; Mature: 55759
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHWIRVSPIALAAAIGLTACGGDDVTSPGLSAVKNVVVIYAENRSFDNLYGNFPGANG CCCCEEEECHHHHHHHHHHEECCCCCCCCCCHHHHCCEEEEEECCCCCHHHCCCCCCCCC LQNVTAASAAQVDRDGTPLATLPKIWGGLTAAGVTPAVTEAMTANLPNAPFAIDDPNGFN HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCEEEECCCCCC TPMSVTTRDLVHRFYENQMQIDGGKNDKYAAWSDAGGLVMGHYTADPSKLPLWKLAQQYT CCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHH LADNFFMGTFGGSFLNHQYLICACAPFYPNADKSPAASQISVVNPDGVTLTTASNSPASA HHCCCEEECCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHH LSGPPKFVKSGGLTPDFYAVNTMQPPYQPSANAAPTGGDPNLADPANPSTLPPQTQQNIG CCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DLLTSAGVSWAWYAGAWGAALQAAQSGTSGVIYGPNMTSPNFQPHHQPFNYYANQAPGSA HHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCH NRAQHLLDAGSNGAALIQAIDAGKLPQVTFYKPQGNLNEHPGYTDVASGDQHIADVIAHL HHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH QKSPQWNNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAFVISPFAKQGFVDHTQYDT HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCH ASILRFITRRFALPKLAGLKQRDDALVANGFKPMGDLTNALTLSTGN HHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCHHCCCCEEEEECCC >Mature Secondary Structure MNKHWIRVSPIALAAAIGLTACGGDDVTSPGLSAVKNVVVIYAENRSFDNLYGNFPGANG CCCCEEEECHHHHHHHHHHEECCCCCCCCCCHHHHCCEEEEEECCCCCHHHCCCCCCCCC LQNVTAASAAQVDRDGTPLATLPKIWGGLTAAGVTPAVTEAMTANLPNAPFAIDDPNGFN HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCEEEECCCCCC TPMSVTTRDLVHRFYENQMQIDGGKNDKYAAWSDAGGLVMGHYTADPSKLPLWKLAQQYT CCCHHHHHHHHHHHHHCCEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCHHHHHHHHH LADNFFMGTFGGSFLNHQYLICACAPFYPNADKSPAASQISVVNPDGVTLTTASNSPASA HHCCCEEECCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHH LSGPPKFVKSGGLTPDFYAVNTMQPPYQPSANAAPTGGDPNLADPANPSTLPPQTQQNIG CCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH DLLTSAGVSWAWYAGAWGAALQAAQSGTSGVIYGPNMTSPNFQPHHQPFNYYANQAPGSA HHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCCCCH NRAQHLLDAGSNGAALIQAIDAGKLPQVTFYKPQGNLNEHPGYTDVASGDQHIADVIAHL HHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH QKSPQWNNMVVIVTYDENGGFWDHVAPPKGDRWGPGTRIPAFVISPFAKQGFVDHTQYDT HCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCH ASILRFITRRFALPKLAGLKQRDDALVANGFKPMGDLTNALTLSTGN HHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCCHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]