| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is 237811931
Identifier: 237811931
GI number: 237811931
Start: 1607265
End: 1607585
Strand: Reverse
Name: 237811931
Synonym: GBP346_A1671
Alternate gene names: NA
Gene position: 1607585-1607265 (Counterclockwise)
Preceding gene: 237811932
Following gene: 237811930
Centisome position: 39.22
GC content: 75.08
Gene sequence:
>321_bases ATGCGCCGCGACGGCGCGGGGCGCGCGCCTTGGCGCGACGTGCTCGAGATCCGCGATGCGCTGCCTGCCCGCACGCCGCG CATCGGCCCGAACGGCCGGCACGTCCCGCCGCGCCACCGCCGCTCGCCCGCCTTCACGCGCGCCCGGCCCGTTGCCGCGC GGTCGACATCCCGCGAGCGACGGCGGGCGACGCGCAAGCGCGCCGCTCGTTTCGCTCCGCCCCCGCCTCCTTGCTCCAAA GCGTCGTACCCCACCGTTCGCGCGATCGGCCGCGAACCGGTGAGACGCCGACCGGCTGTTCACAACTACATCGGTTTGTA A
Upstream 100 bases:
>100_bases CGAGCCGAACGTACGGATTCCGAATCTGATCGAATGACGCGCGCCGCCTGAGCAGCGCAGCGCCGCACGGCTCGCGCGAC GCGCCCGCGGCGCGCCGTCG
Downstream 100 bases:
>100_bases AAAAGAGACGGAGACGGAAACGCGCGTCGGGCGCAACGGCGGCATGAGCGGCGCGCCGGCGGGCTGCGGCCGCCGCGACA CGCCGCGCGGCGCGGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRRDGAGRAPWRDVLEIRDALPARTPRIGPNGRHVPPRHRRSPAFTRARPVAARSTSRERRRATRKRAARFAPPPPPCSK ASYPTVRAIGREPVRRRPAVHNYIGL
Sequences:
>Translated_106_residues MRRDGAGRAPWRDVLEIRDALPARTPRIGPNGRHVPPRHRRSPAFTRARPVAARSTSRERRRATRKRAARFAPPPPPCSK ASYPTVRAIGREPVRRRPAVHNYIGL >Mature_106_residues MRRDGAGRAPWRDVLEIRDALPARTPRIGPNGRHVPPRHRRSPAFTRARPVAARSTSRERRRATRKRAARFAPPPPPCSK ASYPTVRAIGREPVRRRPAVHNYIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12039; Mature: 12039
Theoretical pI: Translated: 12.71; Mature: 12.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDGAGRAPWRDVLEIRDALPARTPRIGPNGRHVPPRHRRSPAFTRARPVAARSTSRER CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHH RRATRKRAARFAPPPPPCSKASYPTVRAIGREPVRRRPAVHNYIGL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCHHHCCC >Mature Secondary Structure MRRDGAGRAPWRDVLEIRDALPARTPRIGPNGRHVPPRHRRSPAFTRARPVAARSTSRER CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHH RRATRKRAARFAPPPPPCSKASYPTVRAIGREPVRRRPAVHNYIGL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA