| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811912
Identifier: 237811912
GI number: 237811912
Start: 1588435
End: 1589418
Strand: Reverse
Name: 237811912
Synonym: GBP346_A1652
Alternate gene names: NA
Gene position: 1589418-1588435 (Counterclockwise)
Preceding gene: 237811913
Following gene: 237811911
Centisome position: 38.78
GC content: 68.9
Gene sequence:
>984_bases ATGGATCAGGCATCGAACGATCCGGCAGTCGAAACGACAGGCCGCCCCTTCGCCACGCGCACGCATGAGGCACGAAAGGC ACATGAGGCACGTGAGGCGCACGACAAGCGCGCCCCGCTCGTCGACGCATGGTACGGCAGCGGCACCGCGCCGATCGAGG CCGTCGATTCGCATGCGCACGTGTTCCTGCGCAGCCTGCCGCGCATCCCGAGCGCGCGGCACTCGCCGGAATACGACGCG ACGCTCGAATCGTACGTCGCGCATCTGAGCGCATGCGGCATCACGCATGCCGTGCTCGTGCAGCCGAGTTTTCTCGGCAC CGACAATCACTTCTTCGTCGATGCGCTCGCGCGCTATCCCCAGCGCTTTCGCGGCATCGCGGTCGTGAACCCCTGCACCG CCGAGGACGAATTCGCGCGGCTCGAGGCGACGGACGTGGTCGGCATCCGCCTGAATCTCGTCGGCCTGCCGATTCCGGAT TTCACCGCGCCGCGCTGGCGCGCGCTGCTCGCGCGCGCGAACGCGCTCGGCTGGCATGTCGAAGTGCACCGGCGCGCAGC CGATCTGCCGGCGATCATTCCCGCGCTGCTCGATCAATCGTGCCGTGTCGTCGTCGATCATTTCGGGCGGCCGGCACCGC ACCTCGGCACGCTCGATCCGGGCTTCCGGTTCCTGCTGTCGATCGCGGGCACGGGGCAAGTATGGGTCAAGCTATCCGCC GCGTATCGCAACATCGGCTCGGGCGACGGCACCGCGTTCGGCACGCGCGCGGCGCGCGCGCTGCTCGGCGCGTTTGCGCC GAACCGGCTCGTCTGGGGCAGCGACTGGCCGCACACGCAGCATCGCGATCGGACCGATTACCAGACGACGCGCTCGGCGC TCGACGACTGGGTGCCCGATCCGTCCCTGCGGCGCATCATCCTCTGCGACTCGGCGCGCGCGCTATTCCGCTTCGATCGC CAGACGCCCGCGCGCGATACATGA
Upstream 100 bases:
>100_bases CGCGCGATATCCAACCGTCGCAACCCGAGGCCCGGATCCGCGAGGCCGCGCTCTAGACGCCGAGCGGCGCAACGGGCGTC CGTCATTTCGTGGGTTTTTC
Downstream 100 bases:
>100_bases ACCGGCCGTTGCGCGCACCCGCCGCACACCCGATGTATGTCAAAAATTTATGAATATCTCGGCCGGCCGCGCTGGTTCGC GTCAGTGCCGGCCGCTAGAA
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MDQASNDPAVETTGRPFATRTHEARKAHEAREAHDKRAPLVDAWYGSGTAPIEAVDSHAHVFLRSLPRIPSARHSPEYDA TLESYVAHLSACGITHAVLVQPSFLGTDNHFFVDALARYPQRFRGIAVVNPCTAEDEFARLEATDVVGIRLNLVGLPIPD FTAPRWRALLARANALGWHVEVHRRAADLPAIIPALLDQSCRVVVDHFGRPAPHLGTLDPGFRFLLSIAGTGQVWVKLSA AYRNIGSGDGTAFGTRAARALLGAFAPNRLVWGSDWPHTQHRDRTDYQTTRSALDDWVPDPSLRRIILCDSARALFRFDR QTPARDT
Sequences:
>Translated_327_residues MDQASNDPAVETTGRPFATRTHEARKAHEAREAHDKRAPLVDAWYGSGTAPIEAVDSHAHVFLRSLPRIPSARHSPEYDA TLESYVAHLSACGITHAVLVQPSFLGTDNHFFVDALARYPQRFRGIAVVNPCTAEDEFARLEATDVVGIRLNLVGLPIPD FTAPRWRALLARANALGWHVEVHRRAADLPAIIPALLDQSCRVVVDHFGRPAPHLGTLDPGFRFLLSIAGTGQVWVKLSA AYRNIGSGDGTAFGTRAARALLGAFAPNRLVWGSDWPHTQHRDRTDYQTTRSALDDWVPDPSLRRIILCDSARALFRFDR QTPARDT >Mature_327_residues MDQASNDPAVETTGRPFATRTHEARKAHEAREAHDKRAPLVDAWYGSGTAPIEAVDSHAHVFLRSLPRIPSARHSPEYDA TLESYVAHLSACGITHAVLVQPSFLGTDNHFFVDALARYPQRFRGIAVVNPCTAEDEFARLEATDVVGIRLNLVGLPIPD FTAPRWRALLARANALGWHVEVHRRAADLPAIIPALLDQSCRVVVDHFGRPAPHLGTLDPGFRFLLSIAGTGQVWVKLSA AYRNIGSGDGTAFGTRAARALLGAFAPNRLVWGSDWPHTQHRDRTDYQTTRSALDDWVPDPSLRRIILCDSARALFRFDR QTPARDT
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36107; Mature: 36107
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQASNDPAVETTGRPFATRTHEARKAHEAREAHDKRAPLVDAWYGSGTAPIEAVDSHAH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH VFLRSLPRIPSARHSPEYDATLESYVAHLSACGITHAVLVQPSFLGTDNHFFVDALARYP HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH QRFRGIAVVNPCTAEDEFARLEATDVVGIRLNLVGLPIPDFTAPRWRALLARANALGWHV HHHCCEEEECCCCCCHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEE EVHRRAADLPAIIPALLDQSCRVVVDHFGRPAPHLGTLDPGFRFLLSIAGTGQVWVKLSA EEHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEH AYRNIGSGDGTAFGTRAARALLGAFAPNRLVWGSDWPHTQHRDRTDYQTTRSALDDWVPD HHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC PSLRRIILCDSARALFRFDRQTPARDT CCCCEEEEECCCHHHHHCCCCCCCCCC >Mature Secondary Structure MDQASNDPAVETTGRPFATRTHEARKAHEAREAHDKRAPLVDAWYGSGTAPIEAVDSHAH CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH VFLRSLPRIPSARHSPEYDATLESYVAHLSACGITHAVLVQPSFLGTDNHFFVDALARYP HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH QRFRGIAVVNPCTAEDEFARLEATDVVGIRLNLVGLPIPDFTAPRWRALLARANALGWHV HHHCCEEEECCCCCCHHHHHHHHCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHCEEEE EVHRRAADLPAIIPALLDQSCRVVVDHFGRPAPHLGTLDPGFRFLLSIAGTGQVWVKLSA EEHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEH AYRNIGSGDGTAFGTRAARALLGAFAPNRLVWGSDWPHTQHRDRTDYQTTRSALDDWVPD HHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCC PSLRRIILCDSARALFRFDRQTPARDT CCCCEEEEECCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA