| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is flbA [H]
Identifier: 237811867
GI number: 237811867
Start: 1544547
End: 1546076
Strand: Direct
Name: flbA [H]
Synonym: GBP346_A1607
Alternate gene names: 237811867
Gene position: 1544547-1546076 (Clockwise)
Preceding gene: 237811866
Following gene: 237811868
Centisome position: 37.68
GC content: 69.87
Gene sequence:
>1530_bases ATGACGGCGGAACTCGACGCCCGTGTGCGCGCGCTCACGCTGCGCGCGCAGCAACTGTTCGACGACGGCCGCCCGGAGCA GGGCGCGCTGCTCGCCGCGCAGGCGCTCGCGCTCGCGCCGGACGACGCGCTCGCGCTGAAGCTCGTCGGTGTCGCCGAGT GCATGCGCGGCGATCATGCGGCGGGGCTCGTGTATCTCGAGCGGGCGTGCCTGTCGGCGCCCGGGGACGCGAATCTGCAC TACAACGTGGCCGTCGCGCACGAATGCACCGGCTCGCACGAGCGCGCGGCGTTGAGTTACCGCCACTGCCTGCGTCTGCA GCCCGATCATGCTGACGCGCTGTGGAACTACGGCGAATACCTGCGCCTGAACGGCCATTTCGAGGCGGCCGCGCGCTGCT TCGAGGCGCTGCAGGCGCAGGCGTGCCGCTATCCGTCGATGCATCACCGGATGGCCGTCGTCTATACGCATCTGCATCGC TTCGACGACGCACGGCGGCATTTCGCGCTCGCGATGGACGAGAACATCGATACGCGCGTCACGCGCTGGGAGCGCGCGCA TTTGCGGCTCGGCACGCGCGATTTCGCACGCGGCTGGCCGGACTACGACACGCGCTTCGACATCGGACATCTGATCAACG TCCACTGCCATCCGTTTCCGATCCGGCTCTGGCAAGGCGAGCCGCTCGCGGGCAAGACGCTGCTCGTGCACGGCGAACAG GGGCTCGGCGACGAGATCATGTTCGCGTCGATCGTGCCGGACATTGTCCGGCAAGCGGCGCGCGTCGTGCTCGCCTGCGC GCCGTCGCTCGTCTCGCTGTTCCAGCGCGCGTTTCCGTCCGCGATCGTGCGCGCGCACCGCGCGGGCGTCGCGCCCGCGC GCGTGGACGATCTCGGGGCGATCGACTATCAGTCGCCGATCGGCAGCCTGCCGCGCTGGCTGCGCGCGAGCGAGGCATCG TTCGGCACGGGCGCGCCGTATCTGGCGGCGGACCCGGCGCGCGTCGCATGGTTCGGCGCGCGGCTGCGCGCGTTGGCGCC GCGCGCCGATCGCGCGCTGAAAGTCGGCTTGACATGGGGATCGAATCCCGCGGCGGCGGTGCCGTCCGCCGCGCGCCGCG CCACGCGCAAGAGCATGCCGCTGCGGTTGCTCGCGCCGCTCGCGCGGGTGCCGGACGTGCAGTACGTGAGCGTTCAGAAC GCCGAGCTGGGCGAGCAGGCCGCGACCGTGCCCGAGCTCGATCTGATCGATTTCAGCAGCGCGCTTCGGGATTTCGCCGA CACCGCGGCGCTCGTCGCGAATCTTGACGTCGTCGTGAGCGTCGATACGTCGGTCGCGCATCTGGCGGGCGCGCTCGGCA AGACGGCCTATACGCTGCTGATGCGCAATTGCGACTGGCGATACGGATTCGAGGGCGAGCGCTGCGTCTGGTACGAATCG ATGACGCTGCTGCGCCAGACGACGCAGGACGATTGGCTGCCGGTCGTCGATCGGGTGATCGACGCGCTGGCGCGGTATCG CAAGCAATAA
Upstream 100 bases:
>100_bases CTCGTGCAATGCGACCAGCGCGAGCGTGCCGCGCTGATCGCGTGCCTCGCGCCGAATCGCCGAGTCGAAGTGGTCGCGGC GGGGCTCGACGGAGCGTGAC
Downstream 100 bases:
>100_bases GGAGAGAAACATACGCATGGATCACGATCCGCAACTGACCGAACGATGGCTGGAGATACATGCCGAAATCGAAGCGTTGC GCCGCAAGGCGAAGGCGGCA
Product: TPR domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLH YNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHR FDDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGHLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEAS FGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQN AELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTAYTLLMRNCDWRYGFEGERCVWYES MTLLRQTTQDDWLPVVDRVIDALARYRKQ
Sequences:
>Translated_509_residues MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLH YNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHR FDDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGHLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEAS FGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQN AELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTAYTLLMRNCDWRYGFEGERCVWYES MTLLRQTTQDDWLPVVDRVIDALARYRKQ >Mature_508_residues TAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHAAGLVYLERACLSAPGDANLHY NVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEYLRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRF DDARRHFALAMDENIDTRVTRWERAHLRLGTRDFARGWPDYDTRFDIGHLINVHCHPFPIRLWQGEPLAGKTLLVHGEQG LGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGAIDYQSPIGSLPRWLRASEASF GTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWGSNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNA ELGEQAATVPELDLIDFSSALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTAYTLLMRNCDWRYGFEGERCVWYESM TLLRQTTQDDWLPVVDRVIDALARYRKQ
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56200; Mature: 56068
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHA CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH AGLVYLERACLSAPGDANLHYNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEY HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCE LRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRFDDARRHFALAMDENIDTRV EEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRWERAHLRLGTRDFARGWPDYDTRFDIGHLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCC GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IDYQSPIGSLPRWLRASEASFGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC SNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNAELGEQAATVPELDLIDFSS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHH ALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTAYTLLMRNCDWRYGFEGERCVWYES HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH MTLLRQTTQDDWLPVVDRVIDALARYRKQ HHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TAELDARVRALTLRAQQLFDDGRPEQGALLAAQALALAPDDALALKLVGVAECMRGDHA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH AGLVYLERACLSAPGDANLHYNVAVAHECTGSHERAALSYRHCLRLQPDHADALWNYGEY HHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCE LRLNGHFEAAARCFEALQAQACRYPSMHHRMAVVYTHLHRFDDARRHFALAMDENIDTRV EEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHH TRWERAHLRLGTRDFARGWPDYDTRFDIGHLINVHCHPFPIRLWQGEPLAGKTLLVHGEQ HHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCC GLGDEIMFASIVPDIVRQAARVVLACAPSLVSLFQRAFPSAIVRAHRAGVAPARVDDLGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IDYQSPIGSLPRWLRASEASFGTGAPYLAADPARVAWFGARLRALAPRADRALKVGLTWG CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEC SNPAAAVPSAARRATRKSMPLRLLAPLARVPDVQYVSVQNAELGEQAATVPELDLIDFSS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHCCCCCCHHHHHHH ALRDFADTAALVANLDVVVSVDTSVAHLAGALGKTAYTLLMRNCDWRYGFEGERCVWYES HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHH MTLLRQTTQDDWLPVVDRVIDALARYRKQ HHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]