Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811854

Identifier: 237811854

GI number: 237811854

Start: 1533631

End: 1535169

Strand: Direct

Name: 237811854

Synonym: GBP346_A1594

Alternate gene names: NA

Gene position: 1533631-1535169 (Clockwise)

Preceding gene: 237811853

Following gene: 237811855

Centisome position: 37.42

GC content: 69.46

Gene sequence:

>1539_bases
TTGCGCGTCGGCGTGGCACGCAAGGCGTTCGTTCTAGAAAGAGCTCGTTACAACGACAGGAGACATAGCATGCCCCACGA
ATCCCCCCCGTCGTCGAAATCGCGGCGCCTTGTTTTGAAGCTGGGTGGCGGCACCGTTCTCGGCACGTTGCTCGCCGCAT
GCGGGGGCGGCGGCGGGGCGGACGCAGCCGCCGCCGCGCCGCAGCAGCCGCCGCCCGCGGGGCCGAGCTCGAGCGCGAAC
GTCGCGATGACGCTGCCGGCCGACGCGCCGCGCATCGCTCGCGATTTCGCGGGGCTCAGCATCGAAAAGGCGGCGTTGAG
CTATCCGCTGCTGAGCGGCGAGAACGGCAACATGGTCGGCCTGTTCAACCGGCTCGGCGCCGGCGTGTTGCGCATCGGCG
GCAATAGCAGCGACGCGTCCGGCTGGCAGCGCACCGGTCCGGACGAGACGTCGGGCGTCATCACGCCCGCCGCCGTGGAC
CGGCTCGCGAGCTTCGTTCAGGCTTGCCGCTGGCGCGTGATCTACGGGCTCAATTTCGTCGGCAACGACCCCGCGACGAT
CGCCGACGAAGCCGCGTATGCGGCCCAAGCGCTGGGCGTCCAGCTCGCGGGCTTCGAGATCGGCAACGAGCCCGATCTCT
ACGCGCAGCATGGCCTCGCGCCGAACGCGAACACCTATCCGGGCTTCGTGAGCCGCTGGACCACATTCGCGAATGCGATC
CGGGCGGCGGTGCCCGATGCGGTGTTCACGGGCCCGGCGACCGCGTGGAACTATCAGCGTTACACCGTGCCGTTCGCAAG
CGATGCAGCGGGCTTGGTGTCGTTGCTGACGCAGCACCACTACCGCAACCCCGATAGCGCGACGATCGAGGCGATGCTGA
GCCCCGATCCGAGCCTCGCGCCGATGCTGCAAGCGTTGCAGGGTGCGGCGAGCGCGCGCGGCATCGGCTTTCGTCTCGCG
GAGACGAACAGCTATTGGGGCGGCGGCAAGCCGGGCGTGAGCGATGCGCACGCATCCGCGCTCTGGGTGATCAACTTCCT
GTTCGCCGTGGCGCAAGGGGGCGCTTCGGGCGTGAACCTGCATACCGGCGGCGGAGCGTCGTATTCGGCGATCAAGACGA
ACAAGACCGCCGGGACGGTCGCGGCGATCGGGCCGGAGTACTACGGCATCTATCTGTTCAACCAGGCCGCGGGCGGGCGA
CTGATGCAAACCCGCGTCGATTCGGCGGGTACCACGCTGTTCGCGCATGCGGTCGCGGCCGACGGCGGCGGCGTGCGCCT
CATCCTCGTGAATACCGATGCGAACAGCGGCTATGACGTCGCCGTCGATTGCAGCAGCGTGCCGAACGCGCGCGCCGGCA
TCGTCACGACGCTCGGCGGGCCGTCGCTCGGCAGCCTGACGGGCACGCAGATCGACGGCGCGACGTTTGCGCTCGACGGG
AGCGGGGCGCCGCAGGGCGGCCGGCCGGTCGCTTGCGTGAACGGCGTGCTCGGCGTGCATGTCGCGTCCGCGAGCGCGTT
GCTGGTCGACTTCGCGTGA

Upstream 100 bases:

>100_bases
CTCGTGGCGGTGTTTTTTTTTGTTGCGCCGGGTGTCCCGCGCAATCCGCGCGTGGCGGCGGGCGTGGACGCACGCTACAT
CCGGTAACGAAAGTAACGAT

Downstream 100 bases:

>100_bases
GCGGGACGCATGCCGTGCGGCGCGCACGCGCGAACCGAGACGTCTCGCAGCCATCGCTCGCCCATCGGCGCAACGCGGTG
GGCATGCTGCTGCGCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRVGVARKAFVLERARYNDRRHSMPHESPPSSKSRRLVLKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSAN
VAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVD
RLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAI
RAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLA
ETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGR
LMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDG
SGAPQGGRPVACVNGVLGVHVASASALLVDFA

Sequences:

>Translated_512_residues
MRVGVARKAFVLERARYNDRRHSMPHESPPSSKSRRLVLKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSAN
VAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVD
RLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAI
RAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLA
ETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGR
LMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDG
SGAPQGGRPVACVNGVLGVHVASASALLVDFA
>Mature_512_residues
MRVGVARKAFVLERARYNDRRHSMPHESPPSSKSRRLVLKLGGGTVLGTLLAACGGGGGADAAAAAPQQPPPAGPSSSAN
VAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVGLFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVD
RLASFVQACRWRVIYGLNFVGNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAI
RAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATIEAMLSPDPSLAPMLQALQGAASARGIGFRLA
ETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNLHTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGR
LMQTRVDSAGTTLFAHAVAADGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDG
SGAPQGGRPVACVNGVLGVHVASASALLVDFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52138; Mature: 52138

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGVARKAFVLERARYNDRRHSMPHESPPSSKSRRLVLKLGGGTVLGTLLAACGGGGGA
CCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCC
DAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVG
CHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEHHHHCCCEEECCCCCEEE
LFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQACRWRVIYGLNFV
EHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCEEEEEEEEEE
GNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAI
CCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
RAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATIEAMLSPDPSLA
HHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
PMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNL
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
HTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAA
ECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEC
DGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDG
CCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEECCEEEEECC
SGAPQGGRPVACVNGVLGVHVASASALLVDFA
CCCCCCCCCCHHHCCCHHEEECCCCEEEEECC
>Mature Secondary Structure
MRVGVARKAFVLERARYNDRRHSMPHESPPSSKSRRLVLKLGGGTVLGTLLAACGGGGGA
CCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCC
DAAAAAPQQPPPAGPSSSANVAMTLPADAPRIARDFAGLSIEKAALSYPLLSGENGNMVG
CHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEHHHHCCCEEECCCCCEEE
LFNRLGAGVLRIGGNSSDASGWQRTGPDETSGVITPAAVDRLASFVQACRWRVIYGLNFV
EHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHCEEEEEEEEEE
GNDPATIADEAAYAAQALGVQLAGFEIGNEPDLYAQHGLAPNANTYPGFVSRWTTFANAI
CCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
RAAVPDAVFTGPATAWNYQRYTVPFASDAAGLVSLLTQHHYRNPDSATIEAMLSPDPSLA
HHHCCCCEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
PMLQALQGAASARGIGFRLAETNSYWGGGKPGVSDAHASALWVINFLFAVAQGGASGVNL
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEE
HTGGGASYSAIKTNKTAGTVAAIGPEYYGIYLFNQAAGGRLMQTRVDSAGTTLFAHAVAA
ECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEC
DGGGVRLILVNTDANSGYDVAVDCSSVPNARAGIVTTLGGPSLGSLTGTQIDGATFALDG
CCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEECCEEEEECC
SGAPQGGRPVACVNGVLGVHVASASALLVDFA
CCCCCCCCCCHHHCCCHHEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA