| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811852
Identifier: 237811852
GI number: 237811852
Start: 1532689
End: 1533129
Strand: Reverse
Name: 237811852
Synonym: GBP346_A1592
Alternate gene names: NA
Gene position: 1533129-1532689 (Counterclockwise)
Preceding gene: 237811861
Following gene: 237811850
Centisome position: 37.41
GC content: 65.31
Gene sequence:
>441_bases ATGCCGCGGTGCGGACTCGAGACATTCGCGTCGTCCTGTCGGTTCGGTATCGACTATACGGGCGTCACCTGCCGGCAATC TGAACAATTGTCACCGGCCGGCGCACATGGCGCCCGTCACGACATTCGATTCGTTGCACGAAGCATCCGGCGATCGCTTG ACGAAGTGCTTGACGAAGTGCTCGTCGAAGCGCGCGATGTGGTTCGCGATAGCGATGACGACAGCGATAGCGATGGCGAT GGCAACAGCCATCACGACAGCGACAGCGACAGCGAATCATGGCATCGCATCCGTGCGTGCCAACCCGCGCGTCACGCCGT CGATCAGCGCTTGCGCGCGCGGCATTCGACGCGCGCCGTCGCGCAGTTCCGATCGCGGCTCGCGGCAGCCGCCGGCGACC GGTCGACCGGCCGCTCGGCGCATGCACGCATCGGCGCATAG
Upstream 100 bases:
>100_bases TACGCGGCGTTCGCGATCCGTGCCGCCGAATCGGCAAGATCCGACAGTGCACCGGAGCGCGCATCGCTTCGAGATCTCCT CACGGCCGATGCATGGCGAA
Downstream 100 bases:
>100_bases GCGCATCGACGCATGCGTGTCCGAAAGGCATCTCATCGCGGGCTCGAGTATCACAGGCTCGAGTGCGAAGCCGGCATCAC ATCCGAACGCTCACGAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPRCGLETFASSCRFGIDYTGVTCRQSEQLSPAGAHGARHDIRFVARSIRRSLDEVLDEVLVEARDVVRDSDDDSDSDGD GNSHHDSDSDSESWHRIRACQPARHAVDQRLRARHSTRAVAQFRSRLAAAAGDRSTGRSAHARIGA
Sequences:
>Translated_146_residues MPRCGLETFASSCRFGIDYTGVTCRQSEQLSPAGAHGARHDIRFVARSIRRSLDEVLDEVLVEARDVVRDSDDDSDSDGD GNSHHDSDSDSESWHRIRACQPARHAVDQRLRARHSTRAVAQFRSRLAAAAGDRSTGRSAHARIGA >Mature_145_residues PRCGLETFASSCRFGIDYTGVTCRQSEQLSPAGAHGARHDIRFVARSIRRSLDEVLDEVLVEARDVVRDSDDDSDSDGDG NSHHDSDSDSESWHRIRACQPARHAVDQRLRARHSTRAVAQFRSRLAAAAGDRSTGRSAHARIGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16055; Mature: 15923
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRCGLETFASSCRFGIDYTGVTCRQSEQLSPAGAHGARHDIRFVARSIRRSLDEVLDEV CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVEARDVVRDSDDDSDSDGDGNSHHDSDSDSESWHRIRACQPARHAVDQRLRARHSTRAV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AQFRSRLAAAAGDRSTGRSAHARIGA HHHHHHHHHHCCCCCCCCCCHHCCCC >Mature Secondary Structure PRCGLETFASSCRFGIDYTGVTCRQSEQLSPAGAHGARHDIRFVARSIRRSLDEVLDEV CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LVEARDVVRDSDDDSDSDGDGNSHHDSDSDSESWHRIRACQPARHAVDQRLRARHSTRAV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AQFRSRLAAAAGDRSTGRSAHARIGA HHHHHHHHHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA