Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

Click here to switch to the map view.

The map label for this gene is 237811845

Identifier: 237811845

GI number: 237811845

Start: 1529237

End: 1529407

Strand: Direct

Name: 237811845

Synonym: GBP346_A1585

Alternate gene names: NA

Gene position: 1529237-1529407 (Clockwise)

Preceding gene: 237811837

Following gene: 237811847

Centisome position: 37.31

GC content: 65.5

Gene sequence:

>171_bases
ATGCAATGGCCCGACGAGACGGGCATCGCAGAAGTAAAGGTTCGGCGCGAAAGACGGACGGGTTTCCATGGACGGGATGA
CGTCGCGGCAACGGAATGCCTGCATGGCGCAATCACCGTTCCCGGCATGCGTGCAGGCGTTCCGGCGCCCGTCGGCGCGA
GGCCGCTGTAG

Upstream 100 bases:

>100_bases
CGTGGCGCGGATAGCCGCGGCGGCTCGCCGCCCAGAGGCCGCCGATCAGCACATGATCGAAGCCCCATGCGGCGACGCGC
TCGAACAGCGGCGGCCACGC

Downstream 100 bases:

>100_bases
TTTTTACACCGCGAGGCGAGGATCGACGGCGCAGGAGGCGCGAGCGGCCGGTCGTTTTGACCGCACTGCGCCGGCAGTGA
GTGCGCCGCCGTTTTCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MQWPDETGIAEVKVRRERRTGFHGRDDVAATECLHGAITVPGMRAGVPAPVGARPL

Sequences:

>Translated_56_residues
MQWPDETGIAEVKVRRERRTGFHGRDDVAATECLHGAITVPGMRAGVPAPVGARPL
>Mature_56_residues
MQWPDETGIAEVKVRRERRTGFHGRDDVAATECLHGAITVPGMRAGVPAPVGARPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6037; Mature: 6037

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWPDETGIAEVKVRRERRTGFHGRDDVAATECLHGAITVPGMRAGVPAPVGARPL
CCCCCCCCCCCEEEEHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQWPDETGIAEVKVRRERRTGFHGRDDVAATECLHGAITVPGMRAGVPAPVGARPL
CCCCCCCCCCCEEEEHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA