| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
Click here to switch to the map view.
The map label for this gene is malQ [H]
Identifier: 237811839
GI number: 237811839
Start: 1513997
End: 1516201
Strand: Reverse
Name: malQ [H]
Synonym: GBP346_A1579
Alternate gene names: 237811839
Gene position: 1516201-1513997 (Counterclockwise)
Preceding gene: 237811840
Following gene: 237811838
Centisome position: 36.99
GC content: 77.46
Gene sequence:
>2205_bases ATGACCGCCGATCCGCGTCATCCGTCGATCGTCGAGCTCGCGGACGCGGCCGGGCTCGACGCGCACTGGATCGACGCATC GGGCTTCGCGCGGCGGGTCGGCGACGACATGCTCGCGGCGTTGCTCGACGCGCTCGGCTACCCGTGCGACACGCGCGCGG CGCGCGCCGAGAGCGCCGCGCGGCTCGCGGCGCACGCGCAGGCCGCGCCGCGGCTCGTGACGGGCGACGTCGACGCGCCG CTCACGCTGCCCGCCTCGCTCGGACGCCCCGGCGCGTGCTACCGGGTCACCCTCGAAAACGGCGACGCCGTCGCCGGCCG CTTCGCGCAGCCCGCCGGCGCAGCCGTGCTGCCGCCGCTCGCGACGCCCGGCTACCACGTGCTCGACACCGGCGAGCAGC GCACAACGCTCGCCATCGCGCCGCCATCCGCATGGACGCCCGCCGACGCGATGCGCGCCGCAGCGGCCGGCGGCCGCGAA CGCCCGCCGCCGTGGGGCCTCGCGGCGCAACTCTACGGGCTGCGCCGCGAGGCCGACGGCGGCATCGGCGATTTCACCGC GCTTGCCGCCTGCGCGCGCGCCGCCGCCCGGCGCGGCGCGCACGCGCTCGCGATCAGCCCGACGCAGGCGGCCTTCCCCG CGTTGCCCGAGCGCGACAGCCCGTACTCGCCTTCGTCGCGGCTTTGGCGCAACGCCGCCTACATCGACGTCGAAACGGTG CTCGGCGCGCACGCGGCGCGCGCGGCGATCGCCGATGCGGGGCTCGCCGCGCAATGGAGCGCGCTCACGCGCGCGCCGCT CGTCGATTGGCCCGGCGCGGTGCCGGCGAAGCTGCGCGTGCTGCGCCTGCTGTTCGACCGCTGGCGCGCGCGGGCGCCCA CGGGCGCGGATGCGGGCCCGCGGGCGTTCGCGCGCTTTCGGGCACGGCACGCCGGCGCGCTCGACGCACATGCGACGTTC GACGCGTTGCAGGCGTGCTGCATCGACAACGGCATCGGCGCGGACTGGCGGCGTTGGCCGCCCGCATGGCGCACGCCCGA TGCGCCGGACGTCGCCGCGTTCGCGCGCGCGCACGCGCACGACATCGCGTTCCACGCCTTCCTGCAATGGCAGGCCGCGC GCGGGCTCGCGGCCGCGCAACGCGCCGCGCGCGGCCGCGGCATGGCGATCGGCCTGATCGCGGACTTGCCGGTCGGCTGC GACGCGGCGGGCAGCGACGCGTGGCGGGATGGCGATGCGATGCTGCGCGGCCTGTCGATCGGCGCGCCCGCCGATCCGTT CAACGCGCGCGGCCAGGCATGGGGCGTCACCACGTGGACGCCGACGGCGCTGCGCGCGCGGGGCTTCGCGCCGTTCGTCG AATGTCTGCGCGCGGGCTTCGCGCACGCGGGAGGCGTTCGCATCGATCACGTGCTCGGCCTCGCGCGGCTGTGGGTGGTG CGCGACGGCGCGTACCTGCGCTATCCGCGCGACGATTTGCTGCGGCTCGCCGCGCTCGAATCGTTCCGGCATCGCGCGAT CGTCATCGGCGAGGATCTCGGCACCGTGCCGGCGGATTTCCGCGCGCGGATCGCCGCGCGCGGCATCGTCGGCCTGCGCG CGCTCTGGTTCGAACGGGACCCGGCGGGCGCGTTCCGCGCGCCGGGCGATTGGGATCGTCACGCGGCCGCGACGAGCTCG ACGCACGATCTGCCGACGGTCGCGGGCTGGTGGCGCGGCGTCGATCTCGGCTGGCGATGGCGCGCGGCCGCCTCCGCCTC GGCCTGCGCGCCCGCGTCCTCCCTCTCTCCCGCCTCCGACGCCGAGGCCGAGGCGAACGCCCCGCCCGCGCGGCCCGGCG AATCGGAGGTCGCCGGGCCGGATGCGCTGCCGCCCGAGGTGCGCGACATGCGCCGCGCCGAGCGCGCGGCGCTCTGGCGC GCGCTGCAGCAAGCCGGCGTCGCCGCGCGCGGGCAAAAGATGCCGCCGCGGGATGCGCCCCCCGTCGGTGCGATACTCGC GTACGTCGCGCAAGCGCCCGCGCCGCTCGCGATCTTTCCGCTCGAGGATCTGCTCGCGCTCGAGGGCCAGCCGAACGTGC CGGGCCCGCCGTGCGGGCACCCGAACTGGCGGCGGCGCATGCCGCGCTCCGTCGACGCGCTGTTCGACGCGCCGGCGCGC ACGCGCATCGCCGCCGTGCGGCGCGCGAGGAAGCGCGCGCGATGA
Upstream 100 bases:
>100_bases GGAACGTGAACGGCGTCGCGCGGCGCGGCCGCGCCGTCGACGCGAAGCACATGCCGGCCGTGAAGCACGCGAACGGCGTG AACGGCCAGGACGGCGCGCC
Downstream 100 bases:
>100_bases AGCCGCGCGCGACGCTGCGCCTGCAGTTGCATGCGGGCTTCACGTTCGACGACGCGGCCGCGCACGTCGGCTATTTCGCG CGGCTCGGCGTGAGCCATCT
Product: 4-alpha-glucanotransferase
Products: NA
Alternate protein names: Amylomaltase; Disproportionating enzyme; D-enzyme [H]
Number of amino acids: Translated: 734; Mature: 733
Protein sequence:
>734_residues MTADPRHPSIVELADAAGLDAHWIDASGFARRVGDDMLAALLDALGYPCDTRAARAESAARLAAHAQAAPRLVTGDVDAP LTLPASLGRPGACYRVTLENGDAVAGRFAQPAGAAVLPPLATPGYHVLDTGEQRTTLAIAPPSAWTPADAMRAAAAGGRE RPPPWGLAAQLYGLRREADGGIGDFTALAACARAAARRGAHALAISPTQAAFPALPERDSPYSPSSRLWRNAAYIDVETV LGAHAARAAIADAGLAAQWSALTRAPLVDWPGAVPAKLRVLRLLFDRWRARAPTGADAGPRAFARFRARHAGALDAHATF DALQACCIDNGIGADWRRWPPAWRTPDAPDVAAFARAHAHDIAFHAFLQWQAARGLAAAQRAARGRGMAIGLIADLPVGC DAAGSDAWRDGDAMLRGLSIGAPADPFNARGQAWGVTTWTPTALRARGFAPFVECLRAGFAHAGGVRIDHVLGLARLWVV RDGAYLRYPRDDLLRLAALESFRHRAIVIGEDLGTVPADFRARIAARGIVGLRALWFERDPAGAFRAPGDWDRHAAATSS THDLPTVAGWWRGVDLGWRWRAAASASACAPASSLSPASDAEAEANAPPARPGESEVAGPDALPPEVRDMRRAERAALWR ALQQAGVAARGQKMPPRDAPPVGAILAYVAQAPAPLAIFPLEDLLALEGQPNVPGPPCGHPNWRRRMPRSVDALFDAPAR TRIAAVRRARKRAR
Sequences:
>Translated_734_residues MTADPRHPSIVELADAAGLDAHWIDASGFARRVGDDMLAALLDALGYPCDTRAARAESAARLAAHAQAAPRLVTGDVDAP LTLPASLGRPGACYRVTLENGDAVAGRFAQPAGAAVLPPLATPGYHVLDTGEQRTTLAIAPPSAWTPADAMRAAAAGGRE RPPPWGLAAQLYGLRREADGGIGDFTALAACARAAARRGAHALAISPTQAAFPALPERDSPYSPSSRLWRNAAYIDVETV LGAHAARAAIADAGLAAQWSALTRAPLVDWPGAVPAKLRVLRLLFDRWRARAPTGADAGPRAFARFRARHAGALDAHATF DALQACCIDNGIGADWRRWPPAWRTPDAPDVAAFARAHAHDIAFHAFLQWQAARGLAAAQRAARGRGMAIGLIADLPVGC DAAGSDAWRDGDAMLRGLSIGAPADPFNARGQAWGVTTWTPTALRARGFAPFVECLRAGFAHAGGVRIDHVLGLARLWVV RDGAYLRYPRDDLLRLAALESFRHRAIVIGEDLGTVPADFRARIAARGIVGLRALWFERDPAGAFRAPGDWDRHAAATSS THDLPTVAGWWRGVDLGWRWRAAASASACAPASSLSPASDAEAEANAPPARPGESEVAGPDALPPEVRDMRRAERAALWR ALQQAGVAARGQKMPPRDAPPVGAILAYVAQAPAPLAIFPLEDLLALEGQPNVPGPPCGHPNWRRRMPRSVDALFDAPAR TRIAAVRRARKRAR >Mature_733_residues TADPRHPSIVELADAAGLDAHWIDASGFARRVGDDMLAALLDALGYPCDTRAARAESAARLAAHAQAAPRLVTGDVDAPL TLPASLGRPGACYRVTLENGDAVAGRFAQPAGAAVLPPLATPGYHVLDTGEQRTTLAIAPPSAWTPADAMRAAAAGGRER PPPWGLAAQLYGLRREADGGIGDFTALAACARAAARRGAHALAISPTQAAFPALPERDSPYSPSSRLWRNAAYIDVETVL GAHAARAAIADAGLAAQWSALTRAPLVDWPGAVPAKLRVLRLLFDRWRARAPTGADAGPRAFARFRARHAGALDAHATFD ALQACCIDNGIGADWRRWPPAWRTPDAPDVAAFARAHAHDIAFHAFLQWQAARGLAAAQRAARGRGMAIGLIADLPVGCD AAGSDAWRDGDAMLRGLSIGAPADPFNARGQAWGVTTWTPTALRARGFAPFVECLRAGFAHAGGVRIDHVLGLARLWVVR DGAYLRYPRDDLLRLAALESFRHRAIVIGEDLGTVPADFRARIAARGIVGLRALWFERDPAGAFRAPGDWDRHAAATSST HDLPTVAGWWRGVDLGWRWRAAASASACAPASSLSPASDAEAEANAPPARPGESEVAGPDALPPEVRDMRRAERAALWRA LQQAGVAARGQKMPPRDAPPVGAILAYVAQAPAPLAIFPLEDLLALEGQPNVPGPPCGHPNWRRRMPRSVDALFDAPART RIAAVRRARKRAR
Specific function: Unknown
COG id: COG1640
COG function: function code G; 4-alpha-glucanotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the disproportionating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1789821, Length=719, Percent_Identity=30.7371349095967, Blast_Score=309, Evalue=5e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003385 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF02446 Glyco_hydro_77 [H]
EC number: =2.4.1.25 [H]
Molecular weight: Translated: 77650; Mature: 77518
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADPRHPSIVELADAAGLDAHWIDASGFARRVGDDMLAALLDALGYPCDTRAARAESAA CCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLAAHAQAAPRLVTGDVDAPLTLPASLGRPGACYRVTLENGDAVAGRFAQPAGAAVLPPL HHHHHHHHCCEEEECCCCCCEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCC ATPGYHVLDTGEQRTTLAIAPPSAWTPADAMRAAAAGGRERPPPWGLAAQLYGLRREADG CCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC GIGDFTALAACARAAARRGAHALAISPTQAAFPALPERDSPYSPSSRLWRNAAYIDVETV CCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCHHHHHHCCCEEEHHHH LGAHAARAAIADAGLAAQWSALTRAPLVDWPGAVPAKLRVLRLLFDRWRARAPTGADAGP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH RAFARFRARHAGALDAHATFDALQACCIDNGIGADWRRWPPAWRTPDAPDVAAFARAHAH HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHH DIAFHAFLQWQAARGLAAAQRAARGRGMAIGLIADLPVGCDAAGSDAWRDGDAMLRGLSI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCC GAPADPFNARGQAWGVTTWTPTALRARGFAPFVECLRAGFAHAGGVRIDHVLGLARLWVV CCCCCCCCCCCCEECCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE RDGAYLRYPRDDLLRLAALESFRHRAIVIGEDLGTVPADFRARIAARGIVGLRALWFERD ECCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PAGAFRAPGDWDRHAAATSSTHDLPTVAGWWRGVDLGWRWRAAASASACAPASSLSPASD CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCC AEAEANAPPARPGESEVAGPDALPPEVRDMRRAERAALWRALQQAGVAARGQKMPPRDAP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC PVGAILAYVAQAPAPLAIFPLEDLLALEGQPNVPGPPCGHPNWRRRMPRSVDALFDAPAR CHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHH TRIAAVRRARKRAR HHHHHHHHHHHHCC >Mature Secondary Structure TADPRHPSIVELADAAGLDAHWIDASGFARRVGDDMLAALLDALGYPCDTRAARAESAA CCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLAAHAQAAPRLVTGDVDAPLTLPASLGRPGACYRVTLENGDAVAGRFAQPAGAAVLPPL HHHHHHHHCCEEEECCCCCCEECCHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCC ATPGYHVLDTGEQRTTLAIAPPSAWTPADAMRAAAAGGRERPPPWGLAAQLYGLRREADG CCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC GIGDFTALAACARAAARRGAHALAISPTQAAFPALPERDSPYSPSSRLWRNAAYIDVETV CCHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCHHHHHHCCCEEEHHHH LGAHAARAAIADAGLAAQWSALTRAPLVDWPGAVPAKLRVLRLLFDRWRARAPTGADAGP HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH RAFARFRARHAGALDAHATFDALQACCIDNGIGADWRRWPPAWRTPDAPDVAAFARAHAH HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHH DIAFHAFLQWQAARGLAAAQRAARGRGMAIGLIADLPVGCDAAGSDAWRDGDAMLRGLSI HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCC GAPADPFNARGQAWGVTTWTPTALRARGFAPFVECLRAGFAHAGGVRIDHVLGLARLWVV CCCCCCCCCCCCEECCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHE RDGAYLRYPRDDLLRLAALESFRHRAIVIGEDLGTVPADFRARIAARGIVGLRALWFERD ECCCEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PAGAFRAPGDWDRHAAATSSTHDLPTVAGWWRGVDLGWRWRAAASASACAPASSLSPASD CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCC AEAEANAPPARPGESEVAGPDALPPEVRDMRRAERAALWRALQQAGVAARGQKMPPRDAP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC PVGAILAYVAQAPAPLAIFPLEDLLALEGQPNVPGPPCGHPNWRRRMPRSVDALFDAPAR CHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCHH TRIAAVRRARKRAR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2845225; 9278503 [H]