Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811822

Identifier: 237811822

GI number: 237811822

Start: 1500368

End: 1501159

Strand: Direct

Name: 237811822

Synonym: GBP346_A1563

Alternate gene names: NA

Gene position: 1500368-1501159 (Clockwise)

Preceding gene: 237811820

Following gene: 237811825

Centisome position: 36.61

GC content: 58.59

Gene sequence:

>792_bases
ATGAGCGATGACACTGCAAAGCGAGTTAAGCAGGCGGTGGAAGATGGGCGACTTCCCAATATGCGTGATCCGGCTATCGT
TGGGTACATCCCTCCGGCTGCTGGATTGGCACGCGCTCGCTTCGTCGGCTATTTCGAGCTTGGCACGCATGAGGAAGAAT
TCGAGGGCAAGAAGCGCGACCGCGAAAAAGTCGATCTGGTCTTTGAACTGAGCGGCTCGAACCACGAGCCTACCGTACAG
GGAGGGCAGACGATCCCGGTACGGATCACTGCGCAGGAGACGTTAGACATGTCCTACGGGTCCAGCTTCTATCAGCTATT
CGACGCAATGGACAGGGCATGCGGCGGAGGGGCTACCCACATAGCCGAGATGCTGGGTAAGCCGTTTATCGTTGAGGTGT
TCCACCGCAAGAGCAAGGACGGCAAGAAAACGTACGCGAATCTGCGCGGCCCACACGGCTACAACGTGAAGGGAGCGACG
GTTCAAGACCCGCTGACTGGCAAGCCGGGACTGGTCGAAGTCGCACCGGCAATTACCGACGTGAAGGCGTTTATCTGGAG
CATCGCAGCCCCCGTTGACTGGTACGGCATCCACATACCCGGCGAGTACCCAGAGACGCGCGACGCAGACGGAAGATTGA
CTGTTCCCGCGCGCTCGAAAAATGTGATTCAGGAAAAGATCGTGGCGGCGAAGAATTGGGCCAGTCATCCGTTGTCGAAG
GAGGCTCCGTTCGCACCAGAGATGCAAGAGCCGCCCCGGAAGCAGACAGGGCGGCCCCGAAAGTCTCCTTAA

Upstream 100 bases:

>100_bases
GAAATATTCTTCCGGTGTTGTCATCGAGCGACAGCGGCGGGAGGCCAAGCCCGGATTTACGCCTTGTTAAGATGCCGAAT
CGATTCCTTTCGAGGTTGGC

Downstream 100 bases:

>100_bases
CCTAGCTTCTTCGCCAAATCCTCGGCGCGCAGATGCGTGTAGCGTTGGAGCATGCTCAGCGTCTTATGGCCGGTGATGCT
GGCAACTTCCATCGGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSDDTAKRVKQAVEDGRLPNMRDPAIVGYIPPAAGLARARFVGYFELGTHEEEFEGKKRDREKVDLVFELSGSNHEPTVQ
GGQTIPVRITAQETLDMSYGSSFYQLFDAMDRACGGGATHIAEMLGKPFIVEVFHRKSKDGKKTYANLRGPHGYNVKGAT
VQDPLTGKPGLVEVAPAITDVKAFIWSIAAPVDWYGIHIPGEYPETRDADGRLTVPARSKNVIQEKIVAAKNWASHPLSK
EAPFAPEMQEPPRKQTGRPRKSP

Sequences:

>Translated_263_residues
MSDDTAKRVKQAVEDGRLPNMRDPAIVGYIPPAAGLARARFVGYFELGTHEEEFEGKKRDREKVDLVFELSGSNHEPTVQ
GGQTIPVRITAQETLDMSYGSSFYQLFDAMDRACGGGATHIAEMLGKPFIVEVFHRKSKDGKKTYANLRGPHGYNVKGAT
VQDPLTGKPGLVEVAPAITDVKAFIWSIAAPVDWYGIHIPGEYPETRDADGRLTVPARSKNVIQEKIVAAKNWASHPLSK
EAPFAPEMQEPPRKQTGRPRKSP
>Mature_262_residues
SDDTAKRVKQAVEDGRLPNMRDPAIVGYIPPAAGLARARFVGYFELGTHEEEFEGKKRDREKVDLVFELSGSNHEPTVQG
GQTIPVRITAQETLDMSYGSSFYQLFDAMDRACGGGATHIAEMLGKPFIVEVFHRKSKDGKKTYANLRGPHGYNVKGATV
QDPLTGKPGLVEVAPAITDVKAFIWSIAAPVDWYGIHIPGEYPETRDADGRLTVPARSKNVIQEKIVAAKNWASHPLSKE
APFAPEMQEPPRKQTGRPRKSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28952; Mature: 28821

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDTAKRVKQAVEDGRLPNMRDPAIVGYIPPAAGLARARFVGYFELGTHEEEFEGKKRD
CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHEEEEECCCCHHHHHHHHCC
REKVDLVFELSGSNHEPTVQGGQTIPVRITAQETLDMSYGSSFYQLFDAMDRACGGGATH
CCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHCCHHCHHHHHHHHHHHHHCCCCHHH
IAEMLGKPFIVEVFHRKSKDGKKTYANLRGPHGYNVKGATVQDPLTGKPGLVEVAPAITD
HHHHHCCCCEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEHHHHHHH
VKAFIWSIAAPVDWYGIHIPGEYPETRDADGRLTVPARSKNVIQEKIVAAKNWASHPLSK
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
EAPFAPEMQEPPRKQTGRPRKSP
CCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SDDTAKRVKQAVEDGRLPNMRDPAIVGYIPPAAGLARARFVGYFELGTHEEEFEGKKRD
CCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHEEEEECCCCHHHHHHHHCC
REKVDLVFELSGSNHEPTVQGGQTIPVRITAQETLDMSYGSSFYQLFDAMDRACGGGATH
CCCEEEEEEECCCCCCCCCCCCCEEEEEEEHHHHHCCHHCHHHHHHHHHHHHHCCCCHHH
IAEMLGKPFIVEVFHRKSKDGKKTYANLRGPHGYNVKGATVQDPLTGKPGLVEVAPAITD
HHHHHCCCCEEHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCEEEHHHHHHH
VKAFIWSIAAPVDWYGIHIPGEYPETRDADGRLTVPARSKNVIQEKIVAAKNWASHPLSK
HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC
EAPFAPEMQEPPRKQTGRPRKSP
CCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA