| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811798
Identifier: 237811798
GI number: 237811798
Start: 1472543
End: 1473025
Strand: Reverse
Name: 237811798
Synonym: GBP346_A1536
Alternate gene names: NA
Gene position: 1473025-1472543 (Counterclockwise)
Preceding gene: 237811801
Following gene: 237811797
Centisome position: 35.94
GC content: 60.04
Gene sequence:
>483_bases ATGCCTGCCCAATGCTTCTTCACGCTCAATGGTCAACGCGTTTCCAATCTCACCTGCGCCGGCTTCGGTGGTGTGATGGC GTTCTCGGGCAATAAGCAGTTCGTCGACAAGCCCGATGCAACGGCCGTCGCCAACGCTGGACCGATCCCCAAGGGCCGCT ATTACATCGTGAAGCGCGACACGGGCGGCCGACTCGGGCCAATTCGCGATCTCGCACTGGATCTGTGGTCAAACAGCGAC CGCTCGACATGGTTCGCGCTTTACCGCGCCGACGCCAAAATCGATGACGAGACCTACGTGAACGGCGTTAAGCGCAGCGC ATTTCGTCTGCACCCAAATGGTCGATGGGGGGTGAGCGACGGCTGCATCACGGTCACGACGCAGGTGCAGTTCGACCAGC TACGTGCGTATCTCATGAAACAGCCGACCGCGAAGATCCCCGGAACCGACATCGAGTATTACGGCACGGTGGACGTCCGA TGA
Upstream 100 bases:
>100_bases ACTATTAGCTCCACCAAACGGTGCGATTCAATTCGGCAGGGCTGGCATAAATCCAATTCGGTCGGGTATATTCGTCACAT CTTTCGGGGGAGATGAATCG
Downstream 100 bases:
>100_bases AAACGTTCGTGCGCCTCGCCATCGCGGCGGTTCTGACGCCCTTCATTTTCTTCGGGCTGTCGCGCATCGACCCACTCGCG CGCTGGGTGGGTAGTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPAQCFFTLNGQRVSNLTCAGFGGVMAFSGNKQFVDKPDATAVANAGPIPKGRYYIVKRDTGGRLGPIRDLALDLWSNSD RSTWFALYRADAKIDDETYVNGVKRSAFRLHPNGRWGVSDGCITVTTQVQFDQLRAYLMKQPTAKIPGTDIEYYGTVDVR
Sequences:
>Translated_160_residues MPAQCFFTLNGQRVSNLTCAGFGGVMAFSGNKQFVDKPDATAVANAGPIPKGRYYIVKRDTGGRLGPIRDLALDLWSNSD RSTWFALYRADAKIDDETYVNGVKRSAFRLHPNGRWGVSDGCITVTTQVQFDQLRAYLMKQPTAKIPGTDIEYYGTVDVR >Mature_159_residues PAQCFFTLNGQRVSNLTCAGFGGVMAFSGNKQFVDKPDATAVANAGPIPKGRYYIVKRDTGGRLGPIRDLALDLWSNSDR STWFALYRADAKIDDETYVNGVKRSAFRLHPNGRWGVSDGCITVTTQVQFDQLRAYLMKQPTAKIPGTDIEYYGTVDVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17707; Mature: 17576
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQCFFTLNGQRVSNLTCAGFGGVMAFSGNKQFVDKPDATAVANAGPIPKGRYYIVKRD CCCEEEEEECCCEECEEEEECCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCEEEEEEC TGGRLGPIRDLALDLWSNSDRSTWFALYRADAKIDDETYVNGVKRSAFRLHPNGRWGVSD CCCCCCCHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCCCCCCC GCITVTTQVQFDQLRAYLMKQPTAKIPGTDIEYYGTVDVR CEEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure PAQCFFTLNGQRVSNLTCAGFGGVMAFSGNKQFVDKPDATAVANAGPIPKGRYYIVKRD CCEEEEEECCCEECEEEEECCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCEEEEEEC TGGRLGPIRDLALDLWSNSDRSTWFALYRADAKIDDETYVNGVKRSAFRLHPNGRWGVSD CCCCCCCHHHHHHEECCCCCCCEEEEEEECCCCCCCHHHHCCCCCCEEEECCCCCCCCCC GCITVTTQVQFDQLRAYLMKQPTAKIPGTDIEYYGTVDVR CEEEEEEEECHHHHHHHHHCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA