| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811791
Identifier: 237811791
GI number: 237811791
Start: 1468226
End: 1468669
Strand: Reverse
Name: 237811791
Synonym: GBP346_A1529
Alternate gene names: NA
Gene position: 1468669-1468226 (Counterclockwise)
Preceding gene: 237811794
Following gene: 237811789
Centisome position: 35.83
GC content: 68.69
Gene sequence:
>444_bases ATGAACAACCCACTCCGCCTGATTGCCCGACTGCTGATCCCGTTCGCGACGCTTGCGGCCGCGCCCGCCGCGTCCGCCGA TTCGCAAGCGCTCGACGCCGCGCTCGACTGTTCGTCGACGGGCCACGCGTTCGTCGCGCCGCTCGTCGCGAGCGGCGCGG TCCGCTCGCAGCCGATGCACGTCGAGGCGAACTCGATGAATGCGTTCCGCACGAACCGCTCGCTGAGCGCCTACGGTTTC TCCGTCTACGTCGTGCTCGGCTACCAGGCGAACGACCCGCTCTTCGCGCATGGCGACGGCGAGCCGATCGGCGACTGGGC ATATGGGGTCGTCGTCCGGGGCTCGAAGCAGGCGGTGGAGGCGAAGGTGCGCGCGGCGGGCAGCCAGGCGGTGGTCAAGG ATGCGTTTCCGTTTCTGACGGCGATCGTCTGCACGTCTCCGTAA
Upstream 100 bases:
>100_bases GGCCCGCGGCCGCGAGGCCGCGCCTTTCCCGCCCGACCTCGACCGAGCGGCCCACCTCGGGCCGTCGACAACCCGCCGCC CGTGCGGCGAGCGCCATCGC
Downstream 100 bases:
>100_bases GCGTGGCGGCACGGCGGCCGGCACGCGGGCACCTCGCCGCGCAGCGTGGCCCGCCGGCACCGGCGCGGCCCACGCCCCGC TGATGCCCGGCGCGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNNPLRLIARLLIPFATLAAAPAASADSQALDAALDCSSTGHAFVAPLVASGAVRSQPMHVEANSMNAFRTNRSLSAYGF SVYVVLGYQANDPLFAHGDGEPIGDWAYGVVVRGSKQAVEAKVRAAGSQAVVKDAFPFLTAIVCTSP
Sequences:
>Translated_147_residues MNNPLRLIARLLIPFATLAAAPAASADSQALDAALDCSSTGHAFVAPLVASGAVRSQPMHVEANSMNAFRTNRSLSAYGF SVYVVLGYQANDPLFAHGDGEPIGDWAYGVVVRGSKQAVEAKVRAAGSQAVVKDAFPFLTAIVCTSP >Mature_147_residues MNNPLRLIARLLIPFATLAAAPAASADSQALDAALDCSSTGHAFVAPLVASGAVRSQPMHVEANSMNAFRTNRSLSAYGF SVYVVLGYQANDPLFAHGDGEPIGDWAYGVVVRGSKQAVEAKVRAAGSQAVVKDAFPFLTAIVCTSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15264; Mature: 15264
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPLRLIARLLIPFATLAAAPAASADSQALDAALDCSSTGHAFVAPLVASGAVRSQPMH CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEE VEANSMNAFRTNRSLSAYGFSVYVVLGYQANDPLFAHGDGEPIGDWAYGVVVRGSKQAVE EECCCCCEECCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEEEEEECCHHHHH AKVRAAGSQAVVKDAFPFLTAIVCTSP HHHHHCCCHHHHHHHHHHHHHHEECCC >Mature Secondary Structure MNNPLRLIARLLIPFATLAAAPAASADSQALDAALDCSSTGHAFVAPLVASGAVRSQPMH CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEE VEANSMNAFRTNRSLSAYGFSVYVVLGYQANDPLFAHGDGEPIGDWAYGVVVRGSKQAVE EECCCCCEECCCCCCCCCCEEEEEEEEEECCCCEEECCCCCCCCCEEEEEEEECCHHHHH AKVRAAGSQAVVKDAFPFLTAIVCTSP HHHHHCCCHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA