| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is yeaS [C]
Identifier: 237811772
GI number: 237811772
Start: 1445729
End: 1446391
Strand: Direct
Name: yeaS [C]
Synonym: GBP346_A1510
Alternate gene names: 237811772
Gene position: 1445729-1446391 (Clockwise)
Preceding gene: 237811771
Following gene: 237811773
Centisome position: 35.27
GC content: 68.78
Gene sequence:
>663_bases ATGTTCGGTCACGCACTCGGCATCACGGATCTCTGGACCTATGTGTTCGGCGTGGTGTTCATCATTCTGCTGCCGGGGCC GAACTCGATGTACGTGCTGTCGCTCGCCGCGCAGCGCGGCGTGAAGGCCGGCTATCGCGCCGCGTGCGGCGTGTTCGTCG GCGACACCGTGCTGATGGTGCTGTCCGCCGCGGGCGTCGCGTCGCTGCTGAAGGCGAATCCGCTGCTGTTCTCGGTCGTC AAGTACGGCGGCGCCGCCTACCTGCTGTACATCGGCGTCGGCATGCTGCGCGGCGCGTGGCGCAAGCTCGCGCGGCCCGC CGCGGACGCGGGCGCCGACGTGCGGCGCGCGGTGGACGGCGAGCGGCCGTTTCGCAAGGCGCTCGTCGTGAGCCTCCTGA ACCCGAAGGCGATCCTGTTCTTCATCTCGTTCTTCATCCAGTTCGTCGATCCGGCTTACGCGCATCCGGCGCTGTCGTTC GTCGTGCTGGGCGCGATCGCGCAGCTCGCGAGCTTCGTCTACCTGAGCACGCTGATCTTCACGGGCGCGCGTCTCGCCGA CCACTTCCGGCGCCGCCGCAAACTCGCGGCGGGCGCCTCGGGCGGCGTGGGCGGCATGTTCGTCGGCTTTTCCGTGAAGC TCGCGCTCGCGACGATGAGCTGA
Upstream 100 bases:
>100_bases CACGACATCGGCTATCTGTTCGACCGCTTCACCGCGCTGATGGACGCGGCGAAGGCGCGCAGCGCCTGAACCCGTCGCAT CGATCAAGGAGTCTCGCATC
Downstream 100 bases:
>100_bases GCGCCGCCCGCGGATCGCGCATCAACGATTATTTTCTGAATCCCAAGAGCCATGCCAAAACGCACAGACATCAACAGCAT CCTCATCATCGGCGCCGGCC
Product: leucine export protein LeuE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGMFVGFSVKLALATMS
Sequences:
>Translated_220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGMFVGFSVKLALATMS >Mature_220_residues MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMVLSAAGVASLLKANPLLFSVV KYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDGERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSF VVLGAIAQLASFVYLSTLIFTGARLADHFRRRRKLAAGASGGVGGMFVGFSVKLALATMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788099, Length=209, Percent_Identity=46.4114832535885, Blast_Score=190, Evalue=5e-50, Organism=Escherichia coli, GI48994978, Length=194, Percent_Identity=29.3814432989691, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994979, Length=161, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004778 - InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 23354; Mature: 23354
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDG HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSFVVLGAIAQLASFVYLSTLIF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGARLADHFRRRRKLAAGASGGVGGMFVGFSVKLALATMS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECC >Mature Secondary Structure MFGHALGITDLWTYVFGVVFIILLPGPNSMYVLSLAAQRGVKAGYRAACGVFVGDTVLMV CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHH LSAAGVASLLKANPLLFSVVKYGGAAYLLYIGVGMLRGAWRKLARPAADAGADVRRAVDG HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC ERPFRKALVVSLLNPKAILFFISFFIQFVDPAYAHPALSFVVLGAIAQLASFVYLSTLIF CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGARLADHFRRRRKLAAGASGGVGGMFVGFSVKLALATMS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8169201; 10984043 [H]