Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is yjjL [C]

Identifier: 237811766

GI number: 237811766

Start: 1440420

End: 1441658

Strand: Direct

Name: yjjL [C]

Synonym: GBP346_A1504

Alternate gene names: 237811766

Gene position: 1440420-1441658 (Clockwise)

Preceding gene: 237811765

Following gene: 237811768

Centisome position: 35.14

GC content: 69.98

Gene sequence:

>1239_bases
GTGATCGTGATGTCCCTCATGCAATTTCGCGTGTTCGCGCTGTTCGCGATCGGCTATTTCGTTTCGTACGTCTTTCGCGG
CGTGAATCTCGGCTTCGCGCCGCTCATCACGCGCGAGCTCGGCCTGTCCGCCGCCGATCTCGGGCTGCTGACGAGCCTTT
ACTTTCTTGGTTTCGCGTGCGCGCAGATTCCGGCCGGCGTGCTGCTCGACCGCTACGGCCCGCGTCGCGTGAGCGCCGCG
CTTCTGCTCGTCGCGGCGGCGGGCGCATGGGTGTTCGGCGCCGCGCACGACATCGGCGCGATGATGCTCGGGCGTCTTCT
GATCGGCGTCGGCGTGTCGGTGTGCCTGGGCGGCGCGTTCAAGGCGCTCGCGCAGCATTTCCCGGTCGCGAGGCTGCCGC
TTCTGAACGGCTTCGTGATGGCGGTGGGCGGGCTGGGCGGCGTCGCGGTCGGCTCGCCGCTCGATTGGCTGCTTGGCTTC
GCCGGCTGGCGCGCGGTGTGCGCGGGGCTCGGCGCGTTCACGGTGGCGGTCGCGGCCGCGTTGTGGGCGTTCGCCCCCGA
TGCGCGGCAGAGCCGTCACGACGCGAGCGTCGCCGCGCAATTCGCGGGCACCTGGCGAATCGTCACGAACCGCACGTTCT
GGAAGATCGCGTCGTTTTCGGTCGTCACGCAGGGCGTGTTCTACGCGATGCAATCGCTGTGGGTCGGCGCGTATCTGCGC
GACGTGAGCGGCTTCGCGCCGCGCGACGCGGCCGTGCTCGTGTCCGTGCTCGGCTTCGCGATGATGGCGGGCTGCGTCGG
CTTCGGCGCGGCGGCGCGCGGGCTCGAGCGGCGCGGCATGTCGCTGTATGCGTTCTGCGGGTTCGGGATGGCGCTCTTCG
TCGCGACCCAGCTCGCGATCATGCTGCGCGCGCCGCTGCCCGCCGCGGTGCTGTGGGCGGCGTACGGCGTGTTCGGCGGC
GTCGGCATCCTGAGCTACGCCGTGCTCGCCGAATATTTCCCCGTGCACGTGATCGGCCGTGCGAACACGACGCTCACGCT
CGTCATCTTCGTGCTGATCTTCGGATTCCAGGTGGGCGTGGGCGCGGTGCTGTCGCATTGGCCGATGCGGGCCGGGCATT
ATCCGGCCGAGGCGCATTTGAGCGCGTGGGGCGCGCTCGTCGCGCTGCAGATTGCGAGCGCGGTCTGGTACGTGCTGCCC
GATCGCGCGCTCGACAAGTCCGCCCGGCACGCGGGGTGA

Upstream 100 bases:

>100_bases
GCCGGCGACGCGCGATCGACTATCATCGCCGGACGCCGTCACCTGGGTGACGGCGTTTTCGTTTGCGCGCGCCGCCGGTT
CGTCGGCCGGCGTCTTACCG

Downstream 100 bases:

>100_bases
TTCGCGTCACGCCCGTCGCGGCGGCGCGCGGGCGTCGGCCGGCCGCGCGCCGCGATCGCCGGCGTGGCGCGGCGACGGGC
GTCGGCGCGCGCGTCGCCGT

Product: major facilitator family transporter

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Family Transporter; Transporter MFS Superfamily; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Superfamily Permease

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA
LLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVAVGSPLDWLLGF
AGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR
DVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIMLRAPLPAAVLWAAYGVFGG
VGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSAWGALVALQIASAVWYVLP
DRALDKSARHAG

Sequences:

>Translated_412_residues
MIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA
LLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVAVGSPLDWLLGF
AGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR
DVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIMLRAPLPAAVLWAAYGVFGG
VGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSAWGALVALQIASAVWYVLP
DRALDKSARHAG
>Mature_412_residues
MIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFACAQIPAGVLLDRYGPRRVSAA
LLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAFKALAQHFPVARLPLLNGFVMAVGGLGGVAVGSPLDWLLGF
AGWRAVCAGLGAFTVAVAAALWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR
DVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAIMLRAPLPAAVLWAAYGVFGG
VGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGVGAVLSHWPMRAGHYPAEAHLSAWGALVALQIASAVWYVLP
DRALDKSARHAG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43367; Mature: 43367

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVMSLMQFRVFALFAIGYFVSYVFRGVNLGFAPLITRELGLSAADLGLLTSLYFLGFAC
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AQIPAGVLLDRYGPRRVSAALLLVAAAGAWVFGAAHDIGAMMLGRLLIGVGVSVCLGGAF
HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALAQHFPVARLPLLNGFVMAVGGLGGVAVGSPLDWLLGFAGWRAVCAGLGAFTVAVAAA
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWAFAPDARQSRHDASVAAQFAGTWRIVTNRTFWKIASFSVVTQGVFYAMQSLWVGAYLR
HHHCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVSGFAPRDAAVLVSVLGFAMMAGCVGFGAAARGLERRGMSLYAFCGFGMALFVATQLAI
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
MLRAPLPAAVLWAAYGVFGGVGILSYAVLAEYFPVHVIGRANTTLTLVIFVLIFGFQVGV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH
GAVLSHWPMRAGHYPAEAHLSAWGALVALQIASAVWYVLPDRALDKSARHAG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA