| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811754
Identifier: 237811754
GI number: 237811754
Start: 1429374
End: 1429979
Strand: Direct
Name: 237811754
Synonym: GBP346_A1492
Alternate gene names: NA
Gene position: 1429374-1429979 (Clockwise)
Preceding gene: 237811753
Following gene: 237811755
Centisome position: 34.87
GC content: 70.3
Gene sequence:
>606_bases GTGCCGCTCGTCGACGAAACGGTTTGCAATGAAAGAGGAGGTGGCTACAATTGCCGCCCCATGACATGCCGCGTTCGTTT CGCTTCCGGTCTTTCCTTTTTCTGCGCATTGCTTTGCGCAGTGTCGGCGTTTGAGTGCGCGCGTGCCGCGCAACTGCCCT CGCGCGCCGCCGCGCTTGGCGCGTACTTCGACGCCGACGCCGGCTCGACCGACATCGAAGTCGATCTGATCCACCGCGCG CGCACGCGTGTGCTGGTCGCGGGCGGCGCGTCGGTGCCGGCCGCCGTCGCAGCGGCGCTGTGCGCGGCGCGCGGGCGCGG CGTCGACGTGCGGGTCGTGCTCGATCGGACGGGGCGCGCGACGCGGTACAGCGGCGCGGCGTTCCTCGCGAACGCGGGCA TCGACGTCGTGCTGAGCGATCGCGTGCCGAACGCGCACGGGCCGTTCGTCGTCGTCGACGATGCGGTGGTACTCGGCCGC GCGAGCTTCGCGCAAACGCGCGACGCGCGCGCGGCGGGCAACTTCGACGTGTTCTATCGCGCGCCGCAGCTCGCGCAGTC GTATGCGACGGCATTCTGGCGGCTCTACGGCCTCGCGCGCCGATAA
Upstream 100 bases:
>100_bases TCTGGCCGATTTCCGCTCGTGGGACGGCGTGCGCGCGTGGCTTTCCCGCGTCGATCTCGACGCCTAGCGCGCTTCGCGTG CGCGCGCGGCGACGCGCCGC
Downstream 100 bases:
>100_bases CGGGCGGCGGCTGCGGCGTAGGCGCGGGACGTGCCGCACCGTCGCGCGCGCGTCGACGCCCGCGCCGCCCCGTATCGCCG ACATCGCCGACATCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPLVDETVCNERGGGYNCRPMTCRVRFASGLSFFCALLCAVSAFECARAAQLPSRAAALGAYFDADAGSTDIEVDLIHRA RTRVLVAGGASVPAAVAAALCAARGRGVDVRVVLDRTGRATRYSGAAFLANAGIDVVLSDRVPNAHGPFVVVDDAVVLGR ASFAQTRDARAAGNFDVFYRAPQLAQSYATAFWRLYGLARR
Sequences:
>Translated_201_residues MPLVDETVCNERGGGYNCRPMTCRVRFASGLSFFCALLCAVSAFECARAAQLPSRAAALGAYFDADAGSTDIEVDLIHRA RTRVLVAGGASVPAAVAAALCAARGRGVDVRVVLDRTGRATRYSGAAFLANAGIDVVLSDRVPNAHGPFVVVDDAVVLGR ASFAQTRDARAAGNFDVFYRAPQLAQSYATAFWRLYGLARR >Mature_200_residues PLVDETVCNERGGGYNCRPMTCRVRFASGLSFFCALLCAVSAFECARAAQLPSRAAALGAYFDADAGSTDIEVDLIHRAR TRVLVAGGASVPAAVAAALCAARGRGVDVRVVLDRTGRATRYSGAAFLANAGIDVVLSDRVPNAHGPFVVVDDAVVLGRA SFAQTRDARAAGNFDVFYRAPQLAQSYATAFWRLYGLARR
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21252; Mature: 21121
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVDETVCNERGGGYNCRPMTCRVRFASGLSFFCALLCAVSAFECARAAQLPSRAAALG CCCCCCHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYFDADAGSTDIEVDLIHRARTRVLVAGGASVPAAVAAALCAARGRGVDVRVVLDRTGRA HEECCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC TRYSGAAFLANAGIDVVLSDRVPNAHGPFVVVDDAVVLGRASFAQTRDARAAGNFDVFYR CEECCEEEEECCCEEEEEECCCCCCCCCEEEECCEEEECCCHHHHHCCCCCCCCEEEEEC APQLAQSYATAFWRLYGLARR CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLVDETVCNERGGGYNCRPMTCRVRFASGLSFFCALLCAVSAFECARAAQLPSRAAALG CCCCCHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AYFDADAGSTDIEVDLIHRARTRVLVAGGASVPAAVAAALCAARGRGVDVRVVLDRTGRA HEECCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCC TRYSGAAFLANAGIDVVLSDRVPNAHGPFVVVDDAVVLGRASFAQTRDARAAGNFDVFYR CEECCEEEEECCCEEEEEECCCCCCCCCEEEECCEEEECCCHHHHHCCCCCCCCEEEEEC APQLAQSYATAFWRLYGLARR CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA