| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is pckG [H]
Identifier: 237811740
GI number: 237811740
Start: 1416282
End: 1418132
Strand: Direct
Name: pckG [H]
Synonym: GBP346_A1478
Alternate gene names: 237811740
Gene position: 1416282-1418132 (Clockwise)
Preceding gene: 237811738
Following gene: 237811741
Centisome position: 34.56
GC content: 69.04
Gene sequence:
>1851_bases GTGGTCGCGGCGACGCGCACCGTTCCGATCGACGTTCCCGAATACGTGAAGCACCGCGGCCTGATCGACTGGGTCGCGCG TATCGCGGAGTTGACCGAGCCGGATCGCGTTGTCTGGTGCGACGGTTCGCAGCAGGAGTACGACCGCCTCTGCGACGCGA TGGTCGAACAGCGCACGATGGTGCGCCTCAATCCGGCGAAGCGGCCGAACTCGTTTCTCGCGCTGTCCGATCCGTCCGAC GTCGCGCGTGTCGAAGACCGCACGTTCATCTGCAGCGAGTATCGCGACGACGCGGGCCCGACCAATCACTGGGTCGCGCC CGCCGAAATGCGCGCGACGCTCAACGGCCTGTTTCGCGGCGCGATGCGCGGCCGCACGCTGTACGTCGTGCCGTTCTCGA TGGGCCCGCTCGGCTCGCCGATCGCGCACATCGGCGTCGAGCTCTCGGATAGCCCCTACGTCGTCGTCAACATGCGGATC ATGACGCGCATGGGGCGCGCGGTGCTCGACGCGCTCGGCGAGCGCGGCGAGTACGTGCCGTGCGTGCACAGCGTCGGGCG CCCGCTCGCGGCGGGCGAGCAGGATGTGCCGTGGCCGTGCAATCCGACCAAGTACATCGTGCATTTTCCCGAGTCGCGCG AGATCTGGAGCTTCGGCTCGGGCTACGGCGGCAACGCGCTCCTCGGCAAGAAGTGCTTCGCGCTGCGGATCGCGTCGACG ATGGGGCGCGACGAAGGCTGGCTCGCCGAGCACATGCTGATCCTCGGCGTGACCTCGCCCGAGGGCCGCAAGTATCACAT CGCCGCGGCGTTTCCTTCCGCGTGCGGCAAGACCAACTTCGCGATGCTGATCCCGCCGAAGGGCTTCGAGGGCTGGCGCG TGACGACGATCGGCGACGACATCGCGTGGCTCAAGCCGGGCCGCGACGGGCGGCTGTATGCGATCAACCCGGAGGCGGGC TATTTCGGCGTCGCGCCGGGCACGGGCGAGAAGACCAATCCGAACGCGCTCGCGACGCTCAGGGAGAACGTGATCTTCAC GAACGTCGCGCTCACGGAGGACGGCGACGTCTGGTGGGAAGGCCTCACCGACACGCCGCCCGCGCGGCTCACCGATTGGC AGGGCAACGCATGGACGCCCGAGATCGGCCGCGAGACGGGCCGCAAGGCCGCGCATCCGAACTCGCGCTTCACGGCGCCC GCGTCGCAGTGCCCGTCGATCGACGACGACTGGGAGAACCCGGGCGGCGTGCCGATCGACGCGTTCATCTTCGGCGGCCG CCGCTCGACGACGGTGCCGCTCGTCACCGAGGCGCGCGACTGGATCGAAGGCGTGTACATGGCGGCGACGATGGGCTCGG AGACGACGGCCGCGGCGGCGGGGCAGCAGGGCATCGTGCGGCGCGATCCGTTCGCGATGCTGCCGTTCTGCGGCTACAAC ATGAGCGACTATTTCTCGCACTGGCTCGCGCTCGGCGAGAAGCTCGCGGCGGCGGGCGCGACGTTGCCGAAGATCTACTG CGTGAACTGGTTCCGCAAGGACGCGGACGGCCGCTTCGCGTGGCCCGGCTTCGGCGAGAACATGCGCGTGCTGAAGTGGA TGCTCGACCGGATCGACGGCCGCGGCGAGGGCGTCGAGCACGCGTTCGGCGTGACGCCGCGCTACGAGGATCTGCATTGG GCGGGGCTCGCGTTCTCGCCCGCGCAGTATGCGCAGGTCACGTCGATGAATCCGGACGAATGGCGCGCCGAGCTCGCGCT GCACGCGGAGCTGTTCGACAAGCTGAGCGCGCGGCTGCCGGATGCGCTCGCCGAAACGAAGGCGAGGATCGAGAAAAGGC TCGGCGGCTGA
Upstream 100 bases:
>100_bases ATCGCGTAGCGCCGCTACGCCCGCCGCGCGCGTCATCGCGCGGCGCACGCACGCAATTCTGGTTCTACAACACGGAGACA CTCTCATGACCCGAAGCAAC
Downstream 100 bases:
>100_bases GCAACGCGGCAAATCGCGAGCACGCCGCGCGGCGGCGACGCGGCCGGGACGGCGCGCGCCGGAGCCGCGCGCGAGATATG CCGCTCGCGCCGCCGTGCGC
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLALSDPSD VARVEDRTFICSEYRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRI MTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALRIAST MGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAINPEAG YFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAP ASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPFCGYN MSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRYEDLHW AGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG
Sequences:
>Translated_616_residues MVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLALSDPSD VARVEDRTFICSEYRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRI MTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALRIAST MGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAINPEAG YFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAP ASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPFCGYN MSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRYEDLHW AGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG >Mature_616_residues MVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLALSDPSD VARVEDRTFICSEYRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRI MTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALRIAST MGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAINPEAG YFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAP ASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPFCGYN MSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRYEDLHW AGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=606, Percent_Identity=50.8250825082508, Blast_Score=592, Evalue=1e-169, Organism=Homo sapiens, GI66346721, Length=610, Percent_Identity=50.327868852459, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI66346723, Length=387, Percent_Identity=52.9715762273902, Blast_Score=391, Evalue=1e-108, Organism=Caenorhabditis elegans, GI71989645, Length=607, Percent_Identity=48.9291598023064, Blast_Score=563, Evalue=1e-160, Organism=Caenorhabditis elegans, GI71989658, Length=607, Percent_Identity=48.9291598023064, Blast_Score=562, Evalue=1e-160, Organism=Caenorhabditis elegans, GI17555492, Length=617, Percent_Identity=49.2706645056726, Blast_Score=556, Evalue=1e-158, Organism=Caenorhabditis elegans, GI71989653, Length=597, Percent_Identity=49.0787269681742, Blast_Score=554, Evalue=1e-158, Organism=Caenorhabditis elegans, GI32564411, Length=558, Percent_Identity=52.5089605734767, Blast_Score=547, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564407, Length=529, Percent_Identity=51.7958412098299, Blast_Score=509, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71989649, Length=482, Percent_Identity=53.1120331950208, Blast_Score=496, Evalue=1e-140, Organism=Caenorhabditis elegans, GI32564409, Length=375, Percent_Identity=49.0666666666667, Blast_Score=324, Evalue=1e-88, Organism=Caenorhabditis elegans, GI17540956, Length=532, Percent_Identity=24.6240601503759, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI24655085, Length=597, Percent_Identity=49.5812395309883, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI24655082, Length=607, Percent_Identity=48.1054365733114, Blast_Score=559, Evalue=1e-159, Organism=Drosophila melanogaster, GI161077226, Length=576, Percent_Identity=48.7847222222222, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI24655088, Length=509, Percent_Identity=50.8840864440079, Blast_Score=516, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 68003; Mature: 68003
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTM CCCCCEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCE VRLNPAKRPNSFLALSDPSDVARVEDRTFICSEYRDDAGPTNHWVAPAEMRATLNGLFRG EEECCCCCCCCEEEECCCCHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRAVLDALGERGEYVP HHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEH CVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALRIAST HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHCCHHHHHHHHHH MGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDD CCCCCCHHEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCC IAWLKPGRDGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWE EEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCEEEC GLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAPASQCPSIDDDWENPGGVPID CCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEE AFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPFCGYN EEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECCCCCCC MSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDG HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCC RGEGVEHAFGVTPRYEDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLP CCCCCHHHCCCCCCCCCCEEECEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC DALAETKARIEKRLGG HHHHHHHHHHHHHHCC >Mature Secondary Structure MVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTM CCCCCEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCE VRLNPAKRPNSFLALSDPSDVARVEDRTFICSEYRDDAGPTNHWVAPAEMRATLNGLFRG EEECCCCCCCCEEEECCCCHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHH AMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRAVLDALGERGEYVP HHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCCCCEEH CVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALRIAST HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHCCHHHHHHHHHH MGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDD CCCCCCHHEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCC IAWLKPGRDGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWE EEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCCCEEEC GLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAPASQCPSIDDDWENPGGVPID CCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEE AFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPFCGYN EEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECCCCCCC MSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDG HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHHHHCCC RGEGVEHAFGVTPRYEDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLP CCCCCHHHCCCCCCCCCCEEECEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC DALAETKARIEKRLGG HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA