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The map label for this gene is ygaY [H]

Identifier: 237811690

GI number: 237811690

Start: 1378579

End: 1379868

Strand: Reverse

Name: ygaY [H]

Synonym: GBP346_A1428

Alternate gene names: 237811690

Gene position: 1379868-1378579 (Counterclockwise)

Preceding gene: 237811694

Following gene: 237811683

Centisome position: 33.67

GC content: 72.48

Gene sequence:

>1290_bases
ATGATCGGCGCTCGCGGCATTTCGCCTTCGTTGATTTCGATCGATGCTCGGACGGCGCGCCCTCCCGCACGCCGCGCCTC
GCCCATACGCACCATGTCCTCACAGCCTCGCCACTCCGCCGGCACGCCCGGCCACTATTCACGCAGCCTGTTGCTGCTGC
TCGCGACGATCGCCGGCGTCTCCGTCGCGAATATCTATTACAACCAGCCGCTGCTCGACGCATTCCGCGCATCGTTCCCG
GGCAGCGCGTCATGGATCGGCGTCGTGCCGACCGCGACGCAGCTCGGCTACGCAACCGGCATGCTCGTCCTCGCGCCGCT
CGGCGACCGCTTCGACCGGCGCACGCTGATCCTGCTGCAGATCGCCGGGCTGTCGGCCGCGCTCGTCGTCGCGGCGGCCG
CGCCGACGCTCGGCGTGCTCGCCGCGGCAAGCCTCGCGATCGGCATCCTCGCGACGATCGCGCAGCAGGCGGTGCCGTTC
GCCGCCGAGATCGCGCCGCCCGCCGCGCGCGGGCAGGCGGTCGGCACCGTGATGAGCGGCCTGCTGCTCGGCATCCTGCT
CGCGCGCACGGCAGCGGGCTTCGTCGCCGAATACTTCGGCTGGCGCGCGGTGTTCGCCGCATCGGTCGCGGCGCTCGCCG
CGCTCGCGGCCGTGATCGTCGCGCGCCTGCCGCGCAGCTCGCCGACATCGACGCTGCCGTACGGCAAGCTGCTCGCGTCG
ATGTGGCAGCTCGTGCGCGAGTTGCGCGGACTGCGCGAGGCGTCGATGACGGGCGGCGCGATCTTCGCCGCGTTCAGCGC
GTTCTGGCCGGTGCTCACGCTGCTGCTCGCGGGCGCGCCGTTTCATCTGGGCCCGCAGGCGGCGGGGCTCTTCGGGATCG
TCGGCGCGGCGGGCGCGCTCGCCGCGCCGTACGCGGGCCGCTTCGCCGACAAGCGCGGCCCGCGCGCGATCATCTCGCTC
GCGATCGCGCTGATCGCCGCGTCGTTCGCGATCTTCGCGCTGTCGGGCGCGAGCCTCATCGGGCTCGTGATCGGCGTGAT
CGTGCTCGACGTCGGCGTGCAGGCCGCGCAGATCTCGAACCAGTCGCGCATCTACGCGCTGAAGCCGGACGCGCGCAGCC
GCGTGAACACGGTGTTCATGGTCTGCTACTTCATCGGCGGCGCGATCGGCTCGTCCGCGGGCGTCGCCGCATGGCGCGCG
ACGGGCTGGCTCGGCATGTGCGCGGTCGGCCTGCTGTTCTCGATCGTCGCGGCGATCGTGCATTTCCGCGGCGGCGCGGG
CGCGCGATAA

Upstream 100 bases:

>100_bases
ACTCGCTCGGACGCCACTATGCAAGCGCGCGGCTTAAGGCGAAATTAACGGCGCGCCGAGCGGGCGCGCGGCGCGCCGGC
GGAATTCCGAGGGCTCCGGT

Downstream 100 bases:

>100_bases
ACGGGGCGTGCGGCTTGTCGAGCGCTTGCGGGGTACGGGGGCGGGACACGAGCCGCGAGGTTCGCGGCTTACGACGGCTC
ACTGCTTGCGGCTCGTGACT

Product: transporter, major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MIGARGISPSLISIDARTARPPARRASPIRTMSSQPRHSAGTPGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFP
GSASWIGVVPTATQLGYATGMLVLAPLGDRFDRRTLILLQIAGLSAALVVAAAAPTLGVLAAASLAIGILATIAQQAVPF
AAEIAPPAARGQAVGTVMSGLLLGILLARTAAGFVAEYFGWRAVFAASVAALAALAAVIVARLPRSSPTSTLPYGKLLAS
MWQLVRELRGLREASMTGGAIFAAFSAFWPVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISL
AIALIAASFAIFALSGASLIGLVIGVIVLDVGVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRA
TGWLGMCAVGLLFSIVAAIVHFRGGAGAR

Sequences:

>Translated_429_residues
MIGARGISPSLISIDARTARPPARRASPIRTMSSQPRHSAGTPGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFP
GSASWIGVVPTATQLGYATGMLVLAPLGDRFDRRTLILLQIAGLSAALVVAAAAPTLGVLAAASLAIGILATIAQQAVPF
AAEIAPPAARGQAVGTVMSGLLLGILLARTAAGFVAEYFGWRAVFAASVAALAALAAVIVARLPRSSPTSTLPYGKLLAS
MWQLVRELRGLREASMTGGAIFAAFSAFWPVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISL
AIALIAASFAIFALSGASLIGLVIGVIVLDVGVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRA
TGWLGMCAVGLLFSIVAAIVHFRGGAGAR
>Mature_429_residues
MIGARGISPSLISIDARTARPPARRASPIRTMSSQPRHSAGTPGHYSRSLLLLLATIAGVSVANIYYNQPLLDAFRASFP
GSASWIGVVPTATQLGYATGMLVLAPLGDRFDRRTLILLQIAGLSAALVVAAAAPTLGVLAAASLAIGILATIAQQAVPF
AAEIAPPAARGQAVGTVMSGLLLGILLARTAAGFVAEYFGWRAVFAASVAALAALAAVIVARLPRSSPTSTLPYGKLLAS
MWQLVRELRGLREASMTGGAIFAAFSAFWPVLTLLLAGAPFHLGPQAAGLFGIVGAAGALAAPYAGRFADKRGPRAIISL
AIALIAASFAIFALSGASLIGLVIGVIVLDVGVQAAQISNQSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRA
TGWLGMCAVGLLFSIVAAIVHFRGGAGAR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=404, Percent_Identity=25.7425742574257, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43763; Mature: 43763

Theoretical pI: Translated: 11.95; Mature: 11.95

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGARGISPSLISIDARTARPPARRASPIRTMSSQPRHSAGTPGHYSRSLLLLLATIAGV
CCCCCCCCCCEEEECCCCCCCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SVANIYYNQPLLDAFRASFPGSASWIGVVPTATQLGYATGMLVLAPLGDRFDRRTLILLQ
HHHHHHCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCEEEECCCCCCCCCEEEEEE
IAGLSAALVVAAAAPTLGVLAAASLAIGILATIAQQAVPFAAEIAPPAARGQAVGTVMSG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCHHHHHHHHH
LLLGILLARTAAGFVAEYFGWRAVFAASVAALAALAAVIVARLPRSSPTSTLPYGKLLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
MWQLVRELRGLREASMTGGAIFAAFSAFWPVLTLLLAGAPFHLGPQAAGLFGIVGAAGAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AAPYAGRFADKRGPRAIISLAIALIAASFAIFALSGASLIGLVIGVIVLDVGVQAAQISN
HCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCC
QSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRATGWLGMCAVGLLFSIVAAIV
CCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFRGGAGAR
HHCCCCCCC
>Mature Secondary Structure
MIGARGISPSLISIDARTARPPARRASPIRTMSSQPRHSAGTPGHYSRSLLLLLATIAGV
CCCCCCCCCCEEEECCCCCCCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SVANIYYNQPLLDAFRASFPGSASWIGVVPTATQLGYATGMLVLAPLGDRFDRRTLILLQ
HHHHHHCCCHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCEEEECCCCCCCCCEEEEEE
IAGLSAALVVAAAAPTLGVLAAASLAIGILATIAQQAVPFAAEIAPPAARGQAVGTVMSG
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCHHHHHHHHH
LLLGILLARTAAGFVAEYFGWRAVFAASVAALAALAAVIVARLPRSSPTSTLPYGKLLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
MWQLVRELRGLREASMTGGAIFAAFSAFWPVLTLLLAGAPFHLGPQAAGLFGIVGAAGAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
AAPYAGRFADKRGPRAIISLAIALIAASFAIFALSGASLIGLVIGVIVLDVGVQAAQISN
HCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCC
QSRIYALKPDARSRVNTVFMVCYFIGGAIGSSAGVAAWRATGWLGMCAVGLLFSIVAAIV
CCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HFRGGAGAR
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]