| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811686
Identifier: 237811686
GI number: 237811686
Start: 1374013
End: 1375965
Strand: Direct
Name: 237811686
Synonym: GBP346_A1424
Alternate gene names: NA
Gene position: 1374013-1375965 (Clockwise)
Preceding gene: 237811685
Following gene: 237811687
Centisome position: 33.52
GC content: 72.61
Gene sequence:
>1953_bases ATGAGCACCGATATGTCGATTTCATTTTCCGTTTCGCTCCGCGCCGTCGCGGCGGCGCTCTCGCTTGCCGCGGCGGGCGC CGCGCAAGCGGCCGCGGACGGCGCGTGCATGGCCCGCAGCCCCGACGGCCGGCAGGCGCTCGTCGAGCTCTATACGAGCG AGGGCTGCAGCAGTTGCCCGCCCGCCGACGACTGGCTCGCACGGCTCGCCGCGCGCCGCGCCGCGTTGCGCGTCGTGCCG CTCGCGCTGCACGTCGATTACTGGGACGGCCTCGGCTGGGCGGATCGCTTCGCGCAGCATCGCTTCACCGAGCGGCAGCA CGCGCTTGCCGCGCGCGGCGGCGGCCGTTTCGTCTATACGCCGGAGGTCGCGGTTGACGGCCGCGAGCTGCGCGACTGGC GCGACGCGGACGCGTTCGGGCGGCGCGTCGTCGCGACGGCGGCCGAGCCCGCGCGCGTCGGCATCGCGCTGGCCGCCAAG CGGCGCGCGGGCGCGCTCGACGTCGCGCTGTCCGTGACGCCGCGCGCCGGCGCGCCGCGCGCGCTCGACGCCTATCTCGC GCTGTACGAGAACGGCGTCGAATCGCAAGTGAGTGCGGGCGAGAACCGAGGCGCGACGCTGCGGCACGAGCGCGTCGTGC GTCAATGGATCGGGCCACTCGCCGCGACGGCCGACGCGCACGCGTCGCTCGACGTGCGGCGCGCGCTGCCGCTGCCCCGC GAACCTGCGCGCGGCGGACGCCGCACGGTATGGGGTCGCGGCGTTTGTCGAGGATCCCGCGACGGGCGACGTCCTGCAGG CGCTCGATTTGCCGCTGTGCGGCTGAACGATGCGCGCGTGATCGATCAACGAACGAGGGTATCGCCGATGAGCGCGACGC CGACGACGAGCGCATCGACAACGGCCATGGCCGGCGCGCGGGCGAGCGGGGCGGCCGACGCGCCGGCACGCGCGCCGACC GGTGCGGACGTCGATGCCGGCGCAACGGCATGGGCCGATGCGACCGCCAATGCGACGGCCAACGCGACGACCGATCCGAC GACCGATCCGACGACCGATCCGACGATAGACGCGACGACCGATGCAATGGCCAACGTAACGACCGACGCGGCGACCCGCG TCACTGCCAACCCGCCGATCCATGAAACAGCCAACGTGCCGGCCAGCACGGCAGCCGCCGCAACGACCGAAGCGGTCGCC GGCGCACGAGCCGGCGCGGCGCTCGATGCGGCACACCCCGGAGCGACCCAAACGATGAGCCAAACGATGGCCCAAACGAT GACCCAAGCGGGCACCGAAGCCGCGAGCCCGGCCGGCACGGACGCGGCCGCGAGCGGCGCCTGCATCACCCGCGCCACGC GTGCGCGCCGGCCGATCCACCCGCTATGGGTGCGCGCGAGCCACTGGCTCAACGCGCTCGCCGCGGTGACGATGGCGCTG TCGGGCTGGCGGATCTACAACGCTTCGCCGATCTACGCGGGCTTCGTGTTTCCGCGCGGCGCGACGCTCGGCGGCTGGCT CGGCGGCGCGCTGCAATGGCACTTCGCGGCGATGTGGCTGCTGTTTTTCAACGGCGTGTTCTATCTGACGATGGGCGTCG CCACCAGGCGTTTCACGCGCAAGCTCCTGCCGCTGAGCGCGTCGGGCGTCGCGCGCGACTTGCGCGACGCGCTGCGCGGG CGGCTGTCGCACGACGATCTGTCCGTGTACAACGCGCTCCAGCGCGCCGCGTACGTCGCGGCGATCGCCGATCTCGCGTT GCTCGTGCTGTCCGGGCTCGTGATCTGGAAATCGGTGCAGTTCCCGCTGCTGCGCGAGTGGCTCGGCGGCTACGACCGCG CGCGCGTCGTGCACTTCTGGGCGATGGCGTTTCTCGTCGCGTTCTTCGTCGTGCATGTCGCGATGGCGGCGCTCGTGCCG CGCTCGCTGCTCGCGATGCTGCGTGGACATTAA
Upstream 100 bases:
>100_bases GGCGGCCTTCGTCTCGCGGCGCGGTGCGCCGCGGGAAGCCGGATCGCGCCGTGCGCGCCGGCGTGCGACGCGCATCGCGC CCGCGCACCGGCTCCGACCG
Downstream 100 bases:
>100_bases AAGGAGTCGCTCATCATGTCGGAAAACGACAGGAAAAAGCGCGAGAACGACATCGCGCGAATCGATCGCGCATCGCTGCT GATCGACGTGCGCAAGTCGC
Product: cytochrome B561
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK RRAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPT GADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVA GARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRG RLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVP RSLLAMLRGH
Sequences:
>Translated_650_residues MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK RRAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPT GADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVA GARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRG RLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVP RSLLAMLRGH >Mature_649_residues STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVPL ALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKR RAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPRE PARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTG ADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAG ARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMALS GWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRGR LSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPR SLLAMLRGH
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68433; Mature: 68302
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP CCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRAGAPR CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCH ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSAST CCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCH TAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTTDPTTDPTIDATT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMS HHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH QTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL HHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTR CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQ HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP CCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRAGAPR CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCH ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSAST CCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCH TAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTTDPTTDPTIDATT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMS HHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH QTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL HHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTR CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQ HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA