Definition Burkholderia pseudomallei MSHR346 chromosome I, complete genome.
Accession NC_012695
Length 4,098,576

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The map label for this gene is 237811686

Identifier: 237811686

GI number: 237811686

Start: 1374013

End: 1375965

Strand: Direct

Name: 237811686

Synonym: GBP346_A1424

Alternate gene names: NA

Gene position: 1374013-1375965 (Clockwise)

Preceding gene: 237811685

Following gene: 237811687

Centisome position: 33.52

GC content: 72.61

Gene sequence:

>1953_bases
ATGAGCACCGATATGTCGATTTCATTTTCCGTTTCGCTCCGCGCCGTCGCGGCGGCGCTCTCGCTTGCCGCGGCGGGCGC
CGCGCAAGCGGCCGCGGACGGCGCGTGCATGGCCCGCAGCCCCGACGGCCGGCAGGCGCTCGTCGAGCTCTATACGAGCG
AGGGCTGCAGCAGTTGCCCGCCCGCCGACGACTGGCTCGCACGGCTCGCCGCGCGCCGCGCCGCGTTGCGCGTCGTGCCG
CTCGCGCTGCACGTCGATTACTGGGACGGCCTCGGCTGGGCGGATCGCTTCGCGCAGCATCGCTTCACCGAGCGGCAGCA
CGCGCTTGCCGCGCGCGGCGGCGGCCGTTTCGTCTATACGCCGGAGGTCGCGGTTGACGGCCGCGAGCTGCGCGACTGGC
GCGACGCGGACGCGTTCGGGCGGCGCGTCGTCGCGACGGCGGCCGAGCCCGCGCGCGTCGGCATCGCGCTGGCCGCCAAG
CGGCGCGCGGGCGCGCTCGACGTCGCGCTGTCCGTGACGCCGCGCGCCGGCGCGCCGCGCGCGCTCGACGCCTATCTCGC
GCTGTACGAGAACGGCGTCGAATCGCAAGTGAGTGCGGGCGAGAACCGAGGCGCGACGCTGCGGCACGAGCGCGTCGTGC
GTCAATGGATCGGGCCACTCGCCGCGACGGCCGACGCGCACGCGTCGCTCGACGTGCGGCGCGCGCTGCCGCTGCCCCGC
GAACCTGCGCGCGGCGGACGCCGCACGGTATGGGGTCGCGGCGTTTGTCGAGGATCCCGCGACGGGCGACGTCCTGCAGG
CGCTCGATTTGCCGCTGTGCGGCTGAACGATGCGCGCGTGATCGATCAACGAACGAGGGTATCGCCGATGAGCGCGACGC
CGACGACGAGCGCATCGACAACGGCCATGGCCGGCGCGCGGGCGAGCGGGGCGGCCGACGCGCCGGCACGCGCGCCGACC
GGTGCGGACGTCGATGCCGGCGCAACGGCATGGGCCGATGCGACCGCCAATGCGACGGCCAACGCGACGACCGATCCGAC
GACCGATCCGACGACCGATCCGACGATAGACGCGACGACCGATGCAATGGCCAACGTAACGACCGACGCGGCGACCCGCG
TCACTGCCAACCCGCCGATCCATGAAACAGCCAACGTGCCGGCCAGCACGGCAGCCGCCGCAACGACCGAAGCGGTCGCC
GGCGCACGAGCCGGCGCGGCGCTCGATGCGGCACACCCCGGAGCGACCCAAACGATGAGCCAAACGATGGCCCAAACGAT
GACCCAAGCGGGCACCGAAGCCGCGAGCCCGGCCGGCACGGACGCGGCCGCGAGCGGCGCCTGCATCACCCGCGCCACGC
GTGCGCGCCGGCCGATCCACCCGCTATGGGTGCGCGCGAGCCACTGGCTCAACGCGCTCGCCGCGGTGACGATGGCGCTG
TCGGGCTGGCGGATCTACAACGCTTCGCCGATCTACGCGGGCTTCGTGTTTCCGCGCGGCGCGACGCTCGGCGGCTGGCT
CGGCGGCGCGCTGCAATGGCACTTCGCGGCGATGTGGCTGCTGTTTTTCAACGGCGTGTTCTATCTGACGATGGGCGTCG
CCACCAGGCGTTTCACGCGCAAGCTCCTGCCGCTGAGCGCGTCGGGCGTCGCGCGCGACTTGCGCGACGCGCTGCGCGGG
CGGCTGTCGCACGACGATCTGTCCGTGTACAACGCGCTCCAGCGCGCCGCGTACGTCGCGGCGATCGCCGATCTCGCGTT
GCTCGTGCTGTCCGGGCTCGTGATCTGGAAATCGGTGCAGTTCCCGCTGCTGCGCGAGTGGCTCGGCGGCTACGACCGCG
CGCGCGTCGTGCACTTCTGGGCGATGGCGTTTCTCGTCGCGTTCTTCGTCGTGCATGTCGCGATGGCGGCGCTCGTGCCG
CGCTCGCTGCTCGCGATGCTGCGTGGACATTAA

Upstream 100 bases:

>100_bases
GGCGGCCTTCGTCTCGCGGCGCGGTGCGCCGCGGGAAGCCGGATCGCGCCGTGCGCGCCGGCGTGCGACGCGCATCGCGC
CCGCGCACCGGCTCCGACCG

Downstream 100 bases:

>100_bases
AAGGAGTCGCTCATCATGTCGGAAAACGACAGGAAAAAGCGCGAGAACGACATCGCGCGAATCGATCGCGCATCGCTGCT
GATCGACGTGCGCAAGTCGC

Product: cytochrome B561

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP
LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK
RRAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR
EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPT
GADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVA
GARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL
SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRG
RLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVP
RSLLAMLRGH

Sequences:

>Translated_650_residues
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVP
LALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAK
RRAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR
EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPT
GADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVA
GARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL
SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRG
RLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVP
RSLLAMLRGH
>Mature_649_residues
STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVPL
ALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKR
RAGALDVALSVTPRAGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPRE
PARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTG
ADVDAGATAWADATANATANATTDPTTDPTTDPTIDATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAG
ARAGAALDAAHPGATQTMSQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMALS
GWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRGR
LSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPR
SLLAMLRGH

Specific function: Unknown

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68433; Mature: 68302

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP
CCCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC
PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT
CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRAGAPR
CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCH
ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR
HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSAST
CCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCH
TAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTTDPTTDPTIDATT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMS
HHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
QTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL
HHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTR
CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQ
HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCP
CCCCEEEEEHHHHHHHHHHHHHHHCHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCCC
PADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYT
CHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRAGAPR
CCEEECCHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCH
ALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPR
HHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCC
EPARGGRRTVWGRGVCRGSRDGRRPAGARFAAVRLNDARVIDQRTRVSPMSATPTTSAST
CCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCH
TAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTTDPTTDPTIDATT
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
DAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMS
HHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
QTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMAL
HHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
SGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTR
CCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQ
HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA