| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811684
Identifier: 237811684
GI number: 237811684
Start: 1373568
End: 1373852
Strand: Direct
Name: 237811684
Synonym: GBP346_A1422
Alternate gene names: NA
Gene position: 1373568-1373852 (Clockwise)
Preceding gene: 237811679
Following gene: 237811685
Centisome position: 33.51
GC content: 60.0
Gene sequence:
>285_bases ATGAAAAGGAATCTGATTGCTTTCGCCTGTGTCGCCTGTGTCGCCGGTTTCGCGCTCGCCGCGCCGTTCGCGCATGCGCA GAACGATGCGATGTCGAAGGACGGCATGGGGATGTCGAAGGACGCGATGTCCGGCGATGCGATGTCGAAGGATGCGATGT CGAAGGACCGGATGGGCAAGCGGCACGATCACATGGCGAAGGGCGGCATGAAGGCCGGCCCCATGTCGAAGGACGCGATG AAAGAACCGATGTCGTCCGACAAGATGAGTCCGATGTCGAACTGA
Upstream 100 bases:
>100_bases GTGCAAGCGCCGGTCCCGAAAAATTTTTGCGCGCCGGTGTCATATCGGCCTTCGCGTCGCGACTATTCGGCTCTTCAATC AATAACGATGGAGCTATCCC
Downstream 100 bases:
>100_bases GCGGCGCGCTTCGCCGCGTCTTCAGCGACGCGAACGGCTTGGCCGCCCGTGCGCTGTTCGGGCGGCCTTCGTCTCGCGGC GCGGTGCGCCGCGGGAAGCC
Product: pentapeptide mxkdx repeat protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKRNLIAFACVACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSGDAMSKDAMSKDRMGKRHDHMAKGGMKAGPMSKDAM KEPMSSDKMSPMSN
Sequences:
>Translated_94_residues MKRNLIAFACVACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSGDAMSKDAMSKDRMGKRHDHMAKGGMKAGPMSKDAM KEPMSSDKMSPMSN >Mature_94_residues MKRNLIAFACVACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSGDAMSKDAMSKDRMGKRHDHMAKGGMKAGPMSKDAM KEPMSSDKMSPMSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9950; Mature: 9950
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 16.0 %Met (Translated Protein) 18.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 16.0 %Met (Mature Protein) 18.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNLIAFACVACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSGDAMSKDAMSKDRMGK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHCHHHHHHHHCCH RHDHMAKGGMKAGPMSKDAMKEPMSSDKMSPMSN HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRNLIAFACVACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSGDAMSKDAMSKDRMGK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHCHHHHHHHHCCH RHDHMAKGGMKAGPMSKDAMKEPMSSDKMSPMSN HHHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA