Click here to switch to the map view.

The map label for this gene is yoaV [H]

Identifier: 237811678

GI number: 237811678

Start: 1368893

End: 1369825

Strand: Reverse

Name: yoaV [H]

Synonym: GBP346_A1415

Alternate gene names: 237811678

Gene position: 1369825-1368893 (Counterclockwise)

Preceding gene: 237811680

Following gene: 237811677

Centisome position: 33.42

GC content: 70.2

Gene sequence:

>933_bases
ATGAACCTCAAGAACGCCCTCCTTTTGATCGTCCTCGCCGCGCTCTGGGGCGCGTCGTTCCTCTTCATCCGCGTCGGCGT
CGCGGAATTCGGCGTCGCGCCGCTGATGGCGCTGCGCGTCGGCATCGGCGCGCTGTTCCTCGTCGCGCTGATGCTCACGC
GCTACGCGCCGCGCGAGCTGATCGCGCTGCTGCGCCAGCACGCGCGGCCGCTCTTCGTCGTCGGCCTGCTCAATTCCGCC
GCGCCGTTCTGCCTGTTCGCGTTCGCCGAGCTCACGCTGTCGGCGGGCGTCACGTCGGTCATCAATGCGACAACGCCGCT
CTGGGGCGCGCTCGTCGCCTACCTGTGGCTGAAGGATTCGCTGTCGCTGCCGCGCGCGCTCGGCCTCGTGATCGGCTTCG
CCGGCGTGCTCACGCTCGTCTGGGATCAGGTGTTCTCGCCGCACGGGGCGAATCCGGCATCACCCGCGACGGCCGCGCTC
GCCGCCGCCGCGGCGCTCGGCGCGACGCTGCTGTACGGCATCGCCGCGAACTTCACGAAACGCAAGCTCACGGGCGTCGA
TCCGCTCGTCAGCGCGACGGGCAGCATGGTCGGCGCGACGATCCTGCTGTTGCCGTTCGCGCTCGCCACGTGGCCCGCCG
CGCCCGTCTCCGCGCACGCATGGGGCTCGGTGCTCGCGCTCGGCATCGCTTGCACGGGCGTCGCCTATTTCATTTTCTTC
CACCTGATCGCGCATATCGGGCCGGCGCGCGCGATCACTGTCACGTTCGTGATCCCGGTGTTCGGCATCCTGTGGGGCGC
GCTCTTTCTCGGCGAGCGCGTGTCGTTCGCGATGCTCGAGGGCTGCGTGATCGTGCTGCTCGGCACCGCGCTCGCCACCG
GCGCGATCAGGCGCATTCCCGGCGTTCGGCCCCAGCGCAACGAGGCGGCCTGA

Upstream 100 bases:

>100_bases
CCCGTATCTTGCTGTTTCATCCCGGGCTGAAACGTCGCGCAACAGCGCGGTGTAAGATGCTTGGCCGATCCTTCTTCGAC
CGCCAAGTGTCCGATCCTCG

Downstream 100 bases:

>100_bases
CGTCGGGCGGCCGGCGTCGCGCGACGCCGGCTGCGGGTTCGGCGCGCCGCCCTCGGCGCGGGGACGGCGCGACAGAGGCT
CGGCGGCGAATCGCGCGATG

Product: permease of the drug/metabolite transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPRELIALLRQHARPLFVVGLLNSA
APFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDSLSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAAL
AAAAALGATLLYGIAANFTKRKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFF
HLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIPGVRPQRNEAA

Sequences:

>Translated_310_residues
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPRELIALLRQHARPLFVVGLLNSA
APFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDSLSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAAL
AAAAALGATLLYGIAANFTKRKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFF
HLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIPGVRPQRNEAA
>Mature_310_residues
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPRELIALLRQHARPLFVVGLLNSA
APFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDSLSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAAL
AAAAALGATLLYGIAANFTKRKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFF
HLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIPGVRPQRNEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32302; Mature: 32302

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IALLRQHARPLFVVGLLNSAAPFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDS
HHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
LSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAALAAAAALGATLLYGIAANFTK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVRPQRNEAA
CCCCCCCCCC
>Mature Secondary Structure
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPREL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IALLRQHARPLFVVGLLNSAAPFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDS
HHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
LSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAALAAAAALGATLLYGIAANFTK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
HLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIP
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GVRPQRNEAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]