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The map label for this gene is yaeJ [C]

Identifier: 237811675

GI number: 237811675

Start: 1365720

End: 1366124

Strand: Direct

Name: yaeJ [C]

Synonym: GBP346_A1412

Alternate gene names: 237811675

Gene position: 1365720-1366124 (Clockwise)

Preceding gene: 237811674

Following gene: 237811679

Centisome position: 33.32

GC content: 67.65

Gene sequence:

>405_bases
ATGACGCTGCGCTACGCATTCTCGCAGGACGAGGTCGAGCTGACGGCGGTTCGCGCGCAAGGCGCGGGCGGGCAGAACGT
CAATAAGGTATCGAGCGCGATTCATCTGCGCTTCGACATTCGCGCGTCGTCACTGCCCGACGACGTGAAGGCGCGGCTTT
TCGCACGCGCCGATCAGCGAATCACGCGCGAAGGCGTCATCGTCATCAAGGCGCAGGAGTACCGCACGCAGGAAAAGAAC
CGCGCGGTCGCGCTGGCGCGGCTCGACACGCTGATTCGCAGCGCGGGCGTCACGCCGCGCAAGCGGGTCGCGACGCGGCC
GACGCGTGCGTCGAAGGAGCGCCGGCTTGCCGAGAAGGGGCGGCGCAGCGAGGTGAAATCCGGGCGCGGCAGAGTCGTCG
AATGA

Upstream 100 bases:

>100_bases
GCGCGGTGCTCGCGCTCGCGATCGCGACGCGCACGGCGCGCGATTCCGGCCTTGCCGCACGAATCGCCGATGCGCTGCGC
GCGCGGCAGGAGGGCGCGCG

Downstream 100 bases:

>100_bases
CGGTGGCCGGCAGCCGGTTTTGTCGCGGCAAATGCCGTGCGCGCAACGGGCGCGACGCGCGGGCGACGCCGGGCGGCGGC
CGGTGACGGCTGCGTCGGGT

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKN
RAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE

Sequences:

>Translated_134_residues
MTLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKN
RAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE
>Mature_133_residues
TLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKNR
AVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=127, Percent_Identity=61.4173228346457, Blast_Score=151, Evalue=2e-38,
Organism=Drosophila melanogaster, GI19921098, Length=128, Percent_Identity=34.375, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15014; Mature: 14883

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQR
CEEEECCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHH
ITREGVIVIKAQEYRTQEKNRAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKG
HCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC
RRSEVKSGRGRVVE
CHHHHHCCCCCCCC
>Mature Secondary Structure 
TLRYAFSQDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQR
EEEECCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHH
ITREGVIVIKAQEYRTQEKNRAVALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKG
HCCCCEEEEEEHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHC
RRSEVKSGRGRVVE
CHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]