Click here to switch to the map view.

The map label for this gene is ywnB [H]

Identifier: 237811660

GI number: 237811660

Start: 1344533

End: 1345174

Strand: Direct

Name: ywnB [H]

Synonym: GBP346_A1397

Alternate gene names: 237811660

Gene position: 1344533-1345174 (Clockwise)

Preceding gene: 237811659

Following gene: 237811662

Centisome position: 32.8

GC content: 69.63

Gene sequence:

>642_bases
ATGACGCAAGGTACTTTGAAAATCGCCCTGTTCGGCGCAACCGGCATGATCGGCTCGCGGATCGCCGCCGAAGCGGCGCG
CCGCGGCCATCAGGTGACGGCGCTGTCGCGCAATCCGGCGGCGAGCGGCGCGAACGTGCAGGCGAAGGCGGCCGACCTGT
TCGATCCGGCGAGCATCGCCGCCGCGCTCGAAGGCCAGGACGTCGTCGCGAGCGCCTATGGGCCGAAGCAGGAGGAGGCA
TCGAAGGTCGTCGCGGTCGCGAAGGCGCTCGTCGACGGCGCGCGCAAGGCGGGCGTGAAGCGCGTCGTCGTCGTGGGCGG
CGCGGGCACGCTCGAAGTCGCTCCCGGCAAGCAGCTCGTCGATACCGAGGGCTTTCCGGATGCGTACAAGGCCGTCGCGC
TCGCGCACCGCGACGCGTACGGCTACCTGTCGACCGTGCAGGACCTCGACTGGACGTTCTTCTCGCCCGCCGCGCTGATC
GCGCCCGGCGAGCGTACCGGCCGGTTCCGCACCGGCGCGGGCAGGCTGATCGTCGACGAGCAAGGCAACAGCAAGATCTC
CGCCGAAGACTATGCGATCGCGTTCGTCGACGAGATCGAGCAAGGCCGTTTCATCCGGCAAGCCGCGACGGCGGCGTACT
GA

Upstream 100 bases:

>100_bases
GGCGGGCGTTTGAGTGACTATGATGGGGATCGTGGATCCCTGTTTTTTTGATCGAATATGTAATCAATGTGATTACATAT
TTACAACCAGGAGAATCGCC

Downstream 100 bases:

>100_bases
TCGTCGCGCGTGATGCCGCCCGCCACGCGGCGGCATGGCGCAAGCCGGGCATGGGGGGGCTGCCCGGCCGCGGGGTTCGG
CCCGGCGGGCAGCGCGCGGC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTQGTLKIALFGATGMIGSRIAAEAARRGHQVTALSRNPAASGANVQAKAADLFDPASIAAALEGQDVVASAYGPKQEEA
SKVVAVAKALVDGARKAGVKRVVVVGGAGTLEVAPGKQLVDTEGFPDAYKAVALAHRDAYGYLSTVQDLDWTFFSPAALI
APGERTGRFRTGAGRLIVDEQGNSKISAEDYAIAFVDEIEQGRFIRQAATAAY

Sequences:

>Translated_213_residues
MTQGTLKIALFGATGMIGSRIAAEAARRGHQVTALSRNPAASGANVQAKAADLFDPASIAAALEGQDVVASAYGPKQEEA
SKVVAVAKALVDGARKAGVKRVVVVGGAGTLEVAPGKQLVDTEGFPDAYKAVALAHRDAYGYLSTVQDLDWTFFSPAALI
APGERTGRFRTGAGRLIVDEQGNSKISAEDYAIAFVDEIEQGRFIRQAATAAY
>Mature_212_residues
TQGTLKIALFGATGMIGSRIAAEAARRGHQVTALSRNPAASGANVQAKAADLFDPASIAAALEGQDVVASAYGPKQEEAS
KVVAVAKALVDGARKAGVKRVVVVGGAGTLEVAPGKQLVDTEGFPDAYKAVALAHRDAYGYLSTVQDLDWTFFSPAALIA
PGERTGRFRTGAGRLIVDEQGNSKISAEDYAIAFVDEIEQGRFIRQAATAAY

Specific function: Unknown

COG id: COG2910

COG function: function code R; Putative NADH-flavin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22095; Mature: 21964

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQGTLKIALFGATGMIGSRIAAEAARRGHQVTALSRNPAASGANVQAKAADLFDPASIA
CCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEHHHCCCCHHHHH
AALEGQDVVASAYGPKQEEASKVVAVAKALVDGARKAGVKRVVVVGGAGTLEVAPGKQLV
HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEE
DTEGFPDAYKAVALAHRDAYGYLSTVQDLDWTFFSPAALIAPGERTGRFRTGAGRLIVDE
CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEECCEEEECCCCCCCCEECCCCEEEEEC
QGNSKISAEDYAIAFVDEIEQGRFIRQAATAAY
CCCCEECCCCEEEEEEHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
TQGTLKIALFGATGMIGSRIAAEAARRGHQVTALSRNPAASGANVQAKAADLFDPASIA
CCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEHHHCCCCHHHHH
AALEGQDVVASAYGPKQEEASKVVAVAKALVDGARKAGVKRVVVVGGAGTLEVAPGKQLV
HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEE
DTEGFPDAYKAVALAHRDAYGYLSTVQDLDWTFFSPAALIAPGERTGRFRTGAGRLIVDE
CCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEECCEEEECCCCCCCCEECCCCEEEEEC
QGNSKISAEDYAIAFVDEIEQGRFIRQAATAAY
CCCCEECCCCEEEEEEHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]