| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811657
Identifier: 237811657
GI number: 237811657
Start: 1343275
End: 1343730
Strand: Direct
Name: 237811657
Synonym: GBP346_A1394
Alternate gene names: NA
Gene position: 1343275-1343730 (Clockwise)
Preceding gene: 237811654
Following gene: 237811658
Centisome position: 32.77
GC content: 76.97
Gene sequence:
>456_bases ATGACGACCGAGATCGCCCACGCAACCGCCCACCTCCGCCGCGCCGGCCGCCGCCCGTTGCGCGCCGTCGCGCTCGCGGC CATCGCCGCCGCCGCGCTCGCCGGATGCAAGAAGCCTGAAGAGGCGAGCGCGCCGCCCGACAATGCGGCGAGCGCCGCCG CGCACGCGGCCCGGCAGACGACTCAGAAGCTCGATCAGGTCGCGAGCTTCGTCAATCAGCAGATCGAGGCGGCGAAGCAG GGCGTCGCATCGGCCGCGTCCGCGGTGCCGCCCGTCACCGCGAGCTCGGTGTCGGCCGCCGCGCAGGGCGCCGCGTCGGC CGTTCTCGGGCAGGCGGCCACCGCGGCCGGCACGAGCCTCGAGGCGGCGGGCCGCAAGCTGCAGCAATGGAGCCAGACGG CCGCGCTCGGCACGTCGGGCGCGTCCGCCGCGAGCGGCGCCGCGGCAAGCCAGTGA
Upstream 100 bases:
>100_bases CAACGACATGTAAAAAAGAAACGGCGGCCGCCGAGTGTGCGCCGGCGCGTCGTATCATCGCGTTTTCGCCACACGGAGCC GCTTTGCCGCGCCATTCGCC
Downstream 100 bases:
>100_bases ATCCGCTTGCATTCCCGGCTAAATGTAATTATGATGGTTACACATTGTCGTCGAGACGGCGTACGAATGCATGCCGCCGC AGGTGAATCATGAATACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQ GVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGASAASGAAASQ
Sequences:
>Translated_151_residues MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQ GVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGASAASGAAASQ >Mature_150_residues TTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQTTQKLDQVASFVNQQIEAAKQG VASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSLEAAGRKLQQWSQTAALGTSGASAASGAAASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14548; Mature: 14417
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQT CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TQKLDQVASFVNQQIEAAKQGVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EAAGRKLQQWSQTAALGTSGASAASGAAASQ HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC >Mature Secondary Structure TTEIAHATAHLRRAGRRPLRAVALAAIAAAALAGCKKPEEASAPPDNAASAAAHAARQT CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TQKLDQVASFVNQQIEAAKQGVASAASAVPPVTASSVSAAAQGAASAVLGQAATAAGTSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH EAAGRKLQQWSQTAALGTSGASAASGAAASQ HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA