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The map label for this gene is cc4 [H]

Identifier: 237811639

GI number: 237811639

Start: 1324209

End: 1324997

Strand: Direct

Name: cc4 [H]

Synonym: GBP346_A1376

Alternate gene names: 237811639

Gene position: 1324209-1324997 (Clockwise)

Preceding gene: 237811638

Following gene: 237811640

Centisome position: 32.31

GC content: 69.2

Gene sequence:

>789_bases
ATGAGCACGGAACGTCTGTTTTCGATTCGCAACCGCTGGTTGACGGTCAGCGTCGGGCTCACGCTGTTCGCGGTGGTCGC
GTCGGTGCTGATCGGCTTCGTCTGGCTGCCGTCGGTGCAAAAGGATGCGCAGTTCCAGGGCATCTGGAACGCGATCTGCA
GCGCGGCCGGCGTGCCGCGCGCGTGGCTGCCGTCGCAGCAGGAGCCGGTGCCCTCGGCCGTCAGGACGAGCACGGTCGTC
GTCACGCCGCAGATGATGGCGGGCGCGGACAGCCTGTCGATCGGCCGCGGCGCGACGCTCGCGATGCGCTGCACGATGTG
CCACGGCGCACGCGGGATGAGCGACGCGAATTCGCCGAACCTCGCGGGCCAGTACGCGGCCGTCATCTACAAGCAGTTGA
AGGATTTCCAGACGGGCGCGCGCACCAACGCGGTGATGGCGCCGATGGTCGTCAATCTGAGCGACCAGGACATGCGCGAT
CTCGCCGCGTTCTACTCGTACCTGCCGCGCACCGCGACGGCGCTTGCCGTGGCGCCGCCGAGGATCGTCGCGAGCGGCGC
GCCGATGCGCAACATCGCGCCGTGCGCGTCGTGCCACGGCGGGATGGACAACAAGGTCGGCGGGCCGAGGCTCGAAGGCG
AGCCGGAGATCTACATCAACGCGCAATTGCAGGCGTTCGCGTCGGGCGCGCGGCACAACGACATCAGCGAGCAGATGCGC
AACGTCGCGCGGCAGATGACGCCCGCCGAGATCGCGGCGGCCGCGCGGTATTACGCGGGGCGGCCGTAG

Upstream 100 bases:

>100_bases
TGATGATCGGCCTCACGGTCGTCAACTACGGCTATCCGATCGCGCAATTGATGTCGCTCAAGCAACCGTCGGTGCCGGCG
ATCTACATGGGGGCGCAGCG

Downstream 100 bases:

>100_bases
CGGGGCGTGGCGCGGGCCTCGAAGGGGCGCCGCGTCGGGCGCCGTCGTGTGGTTGATCGATCGACCGATCGAACGCACGG
TGGTGAAGAAAACGGCAAGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVV
VTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRD
LAAFYSYLPRTATALAVAPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
NVARQMTPAEIAAAARYYAGRP

Sequences:

>Translated_262_residues
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVV
VTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRD
LAAFYSYLPRTATALAVAPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
NVARQMTPAEIAAAARYYAGRP
>Mature_261_residues
STERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPRAWLPSQQEPVPSAVRTSTVVV
TPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPNLAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDL
AAFYSYLPRTATALAVAPPRIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMRN
VARQMTPAEIAAAARYYAGRP

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 28019; Mature: 27887

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPR
CCHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
AWLPSQQEPVPSAVRTSTVVVTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPN
CCCCCCCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDLAAFYSYLPRTATALAVAPP
CHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCC
RIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHH
NVARQMTPAEIAAAARYYAGRP
HHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STERLFSIRNRWLTVSVGLTLFAVVASVLIGFVWLPSVQKDAQFQGIWNAICSAAGVPR
CHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
AWLPSQQEPVPSAVRTSTVVVTPQMMAGADSLSIGRGATLAMRCTMCHGARGMSDANSPN
CCCCCCCCCCCHHHHCCEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
LAGQYAAVIYKQLKDFQTGARTNAVMAPMVVNLSDQDMRDLAAFYSYLPRTATALAVAPP
CHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCCCHHHHHHHHHHHHHHHHHHHHEECCC
RIVASGAPMRNIAPCASCHGGMDNKVGGPRLEGEPEIYINAQLQAFASGARHNDISEQMR
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCCHHHHHHH
NVARQMTPAEIAAAARYYAGRP
HHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]