| Definition | Burkholderia pseudomallei MSHR346 chromosome I, complete genome. |
|---|---|
| Accession | NC_012695 |
| Length | 4,098,576 |
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The map label for this gene is 237811528
Identifier: 237811528
GI number: 237811528
Start: 1213831
End: 1214157
Strand: Reverse
Name: 237811528
Synonym: GBP346_A1258
Alternate gene names: NA
Gene position: 1214157-1213831 (Counterclockwise)
Preceding gene: 237811529
Following gene: 237811527
Centisome position: 29.62
GC content: 77.98
Gene sequence:
>327_bases TTGCCCGCCGTGCCCGCGCGGGTTTACCCCCGCGCGCGGCGAGCCGCGAACCATCCGGGCGCGACGCGCGGCCGCGCGTC GGGCATCGGGCATCGGGCATCGGGCATCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGG CGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGTCGGGCGCGCGCCGGCCGGCGCGCGCCCGCGTGATA AAATCTCGTTCCACTCGACAACGCGCGGCCCAAGCGGCACTCGCCCGCTCAAGCGGCCGCCGGACTCAACGACAGACACA TTGCTAG
Upstream 100 bases:
>100_bases ACGCGTACATCGTCCCCGGCCTGGGCGACGCGGGCGACCGCCTGTTCGGCACGAAGAACTGACGGCCGAAACCGGCGCGC GAAACCGGCGCGAGAAGCGC
Downstream 100 bases:
>100_bases ACGCCGGCGCGGGCTACGCGCGGGCGCACGGAGAAAAGTATGGCTGGTCACTCGAAATGGGCCAACATCAAGCATAAGAA AGCGGCGGCCGATGCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPAVPARVYPRARRAANHPGATRGRASGIGHRASGIGRRASGVGRRASGVGRRASGVGRRASGVGRRASGARRPARARVI KSRSTRQRAAQAALARSSGRRTQRQTHC
Sequences:
>Translated_108_residues MPAVPARVYPRARRAANHPGATRGRASGIGHRASGIGRRASGVGRRASGVGRRASGVGRRASGVGRRASGARRPARARVI KSRSTRQRAAQAALARSSGRRTQRQTHC >Mature_107_residues PAVPARVYPRARRAANHPGATRGRASGIGHRASGIGRRASGVGRRASGVGRRASGVGRRASGVGRRASGARRPARARVIK SRSTRQRAAQAALARSSGRRTQRQTHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11355; Mature: 11224
Theoretical pI: Translated: 13.42; Mature: 13.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVPARVYPRARRAANHPGATRGRASGIGHRASGIGRRASGVGRRASGVGRRASGVGRR CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCHHHCCCCHHHCCCCH ASGVGRRASGARRPARARVIKSRSTRQRAAQAALARSSGRRTQRQTHC HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PAVPARVYPRARRAANHPGATRGRASGIGHRASGIGRRASGVGRRASGVGRRASGVGRR CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHCCCCHHHCCCCHHHCCCCHHHCCCCH ASGVGRRASGARRPARARVIKSRSTRQRAAQAALARSSGRRTQRQTHC HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA