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The map label for this gene is 23502892

Identifier: 23502892

GI number: 23502892

Start: 1967811

End: 1969295

Strand: Reverse

Name: 23502892

Synonym: BR2044

Alternate gene names: NA

Gene position: 1969295-1967811 (Counterclockwise)

Preceding gene: 23502893

Following gene: 23502891

Centisome position: 93.43

GC content: 59.19

Gene sequence:

>1485_bases
TTGGGAGGACAGCCGGATATTGTCATCATCGGATCGGGGATCGGCGGCGCGACAATGGCCGCAGGTCTTGCCGCATCGGG
TGCCGACATTCTCATTCTGGAGGCGGGCGCGCGCCTGGCTGACAGGCCGGAAAACCGTGACCCGCGCGCCATTTTCCAGC
GCGGGTTCTTTCGTCCGAAGGAGTTGTGGTACGAGACCAGTGGTGCGCCGTTCAATCCCGGCAATTATTACAATGTCGGC
GGCAATTCCAAATTCTACGGCGCGGTGCTGATCCGCTATCGGCGTGAGGATTTTGAAGAGCTTGCGCATCTGGAAGGCGT
GTCGCCCGCATGGCCCTTTTCCTATGACGAACTGGAGCCGTGGTATTGCAAGGCGGAAGAACTGTTTCAGGTGCGCGGTG
AATTGGGCGACGACCCGACCGAGCCGCATCATTCAAAGCCTTATCCTTATGCGGCTATCCGTGATGAGCGCCCGATTGCC
GATATGCGGGCACGGCTGAAGAAGGCGGGATTGCATCCGGCCTCCTTGCCATTGGGTGTTGATATTGAGCGTTGGCTGGC
AAAGGCCAGAACGCCATGGGATGCGCATCCCAATTGCGACGATGGCAAGATGGATGCGGAAACCTGTCCGCTTGCGCAAG
CACTTCAATATGCCAATGTCCGGCTGGAAACGTCCGCGCAGGTGAGGCGGCTGGAAGCCGGGCCGGATGGAAAAGCAATC
ACGGCAGTCCATTATGTGAAGAACGGCGAGGCGCTGGTCCTGCGCCCAAAGCTCGTTATTCTATCGGCTGGCGCCGTGCA
GTCGGCGGCACTTTTGCTGCGTTCGGGACTGGCCAATCGCTCCGATCAGGTCGGGCGCAATTTCATGAACCACAACGCAA
GCGCCGTGATTGCCTTCGATCCGCGCTATCGCAATGACAGCGTCTACCAGAAGACTTTTGGTTTCAATGATTACTATCTG
TCGGATGGGGCAGGCGGGCCGCCGCTTGGCAATGTGCAATTGCTGGGGCGGGTGTCGGGCGCAATCCTGAAATCCAATAT
GCGCCACGTGCCCGAATGGCTTTTGAACCGCATCGCCGGGCACACAATTGATTTTTACGCCATGAGCGAAGACCTACCAT
CGCCGGAAAGCCGCGTGAGTGTGGATGGCGACCGCATCATTCTGCATTGGGTGCGCAGTAACTGGAAAGCGCATCTGATG
CTGGTGGAAAAACTCAAATCCGCGCTTCGGGCGGTGGGTTTTCCGGTGGTTCTGTCTCGGGCCTTCGACCGGCGCACGCC
ATCGCATCAATGCGGCACGGCGCGCATCGGCAATGATCCGGCGACAGCGCCGCTCGATCCTTATTGCCGCGCTTACGATC
ACCCCAATCTCTACGTGGTCGATGCGTCGTTCCTGCCAACATCGGCAGCGGTCAATCCGGCGCTGACCATCGCCGCGCAA
GCCTTGCGCGTCGCAGACCGTATCAAGCGGGAGGGTTTTGCATGA

Upstream 100 bases:

>100_bases
TCATGCGGTGGAGGATTACACCGAAACCAAAACGCTCAACATGCATATCGGCGCGCGCACGGGCTGGTGGATGCCGCAAG
CGAAATAGGAGGAGGCGGCT

Downstream 100 bases:

>100_bases
GCCGTCAAAGACCTGTAGCGCTGGTGACTGGCGGGCGGCGGGGGATCGGGCTTAGCATTGCCCGCGCTCTGGCTGCCAAG
GGGTTTGATCTGGCGATCAC

Product: GMC family oxidoreductase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Choline Dehydrogenase; Oxidoreductase; Dehydrogenase; GMC Oxidoreductase; Gluconate 2-Dehydrogenase; Gluconate Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase Subunit-Like Protein; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Glucose Dehydrogenase; Dehydrogenase Subunit; Oxidoreductase GMC Family; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; GMC Oxidoreductase Family; Oxidoreductase-Like Protein; Dehydrogenase Large Subunit Protein; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Dehydrogluconate Dehydrogenase; Sugar-Alcohol Dehydrogenase; Dehydrogenase Flavoprotein Subunit; Glucase Dehydrogenase Subunit Alpha; Transmembrane Dehydrogenase Protein; Dehydrogenase Subunit I; Choline Dehydrogenase-Like Flavoprotein; 2-Keto-Gluconate Dehydrogenase Subunit; Gluconate 2-Dehydrogenase Flavoprotein; Quinoprotein Glucose Dehydrogenase; Flavoproteins Oxidoreductases; Oxidoreductase Chain; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MGGQPDIVIIGSGIGGATMAAGLAASGADILILEAGARLADRPENRDPRAIFQRGFFRPKELWYETSGAPFNPGNYYNVG
GNSKFYGAVLIRYRREDFEELAHLEGVSPAWPFSYDELEPWYCKAEELFQVRGELGDDPTEPHHSKPYPYAAIRDERPIA
DMRARLKKAGLHPASLPLGVDIERWLAKARTPWDAHPNCDDGKMDAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAI
TAVHYVKNGEALVLRPKLVILSAGAVQSAALLLRSGLANRSDQVGRNFMNHNASAVIAFDPRYRNDSVYQKTFGFNDYYL
SDGAGGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAGHTIDFYAMSEDLPSPESRVSVDGDRIILHWVRSNWKAHLM
LVEKLKSALRAVGFPVVLSRAFDRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVDASFLPTSAAVNPALTIAAQ
ALRVADRIKREGFA

Sequences:

>Translated_494_residues
MGGQPDIVIIGSGIGGATMAAGLAASGADILILEAGARLADRPENRDPRAIFQRGFFRPKELWYETSGAPFNPGNYYNVG
GNSKFYGAVLIRYRREDFEELAHLEGVSPAWPFSYDELEPWYCKAEELFQVRGELGDDPTEPHHSKPYPYAAIRDERPIA
DMRARLKKAGLHPASLPLGVDIERWLAKARTPWDAHPNCDDGKMDAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAI
TAVHYVKNGEALVLRPKLVILSAGAVQSAALLLRSGLANRSDQVGRNFMNHNASAVIAFDPRYRNDSVYQKTFGFNDYYL
SDGAGGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAGHTIDFYAMSEDLPSPESRVSVDGDRIILHWVRSNWKAHLM
LVEKLKSALRAVGFPVVLSRAFDRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVDASFLPTSAAVNPALTIAAQ
ALRVADRIKREGFA
>Mature_493_residues
GGQPDIVIIGSGIGGATMAAGLAASGADILILEAGARLADRPENRDPRAIFQRGFFRPKELWYETSGAPFNPGNYYNVGG
NSKFYGAVLIRYRREDFEELAHLEGVSPAWPFSYDELEPWYCKAEELFQVRGELGDDPTEPHHSKPYPYAAIRDERPIAD
MRARLKKAGLHPASLPLGVDIERWLAKARTPWDAHPNCDDGKMDAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAIT
AVHYVKNGEALVLRPKLVILSAGAVQSAALLLRSGLANRSDQVGRNFMNHNASAVIAFDPRYRNDSVYQKTFGFNDYYLS
DGAGGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAGHTIDFYAMSEDLPSPESRVSVDGDRIILHWVRSNWKAHLML
VEKLKSALRAVGFPVVLSRAFDRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVDASFLPTSAAVNPALTIAAQA
LRVADRIKREGFA

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54338; Mature: 54207

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGQPDIVIIGSGIGGATMAAGLAASGADILILEAGARLADRPENRDPRAIFQRGFFRPK
CCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCHHHHHHHCCCCHH
ELWYETSGAPFNPGNYYNVGGNSKFYGAVLIRYRREDFEELAHLEGVSPAWPFSYDELEP
HHHEECCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WYCKAEELFQVRGELGDDPTEPHHSKPYPYAAIRDERPIADMRARLKKAGLHPASLPLGV
CEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
DIERWLAKARTPWDAHPNCDDGKMDAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAI
CHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHCEEEECCHHHHEECCCCCCCEE
TAVHYVKNGEALVLRPKLVILSAGAVQSAALLLRSGLANRSDQVGRNFMNHNASAVIAFD
EEEEEEECCCEEEEECEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC
PRYRNDSVYQKTFGFNDYYLSDGAGGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAG
CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
HTIDFYAMSEDLPSPESRVSVDGDRIILHWVRSNWKAHLMLVEKLKSALRAVGFPVVLSR
CEEEEEEECCCCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHH
AFDRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVDASFLPTSAAVNPALTIAAQ
HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHH
ALRVADRIKREGFA
HHHHHHHHHHCCCC
>Mature Secondary Structure 
GGQPDIVIIGSGIGGATMAAGLAASGADILILEAGARLADRPENRDPRAIFQRGFFRPK
CCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCHHHHHHHCCCCHH
ELWYETSGAPFNPGNYYNVGGNSKFYGAVLIRYRREDFEELAHLEGVSPAWPFSYDELEP
HHHEECCCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WYCKAEELFQVRGELGDDPTEPHHSKPYPYAAIRDERPIADMRARLKKAGLHPASLPLGV
CEECHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
DIERWLAKARTPWDAHPNCDDGKMDAETCPLAQALQYANVRLETSAQVRRLEAGPDGKAI
CHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHCEEEECCHHHHEECCCCCCCEE
TAVHYVKNGEALVLRPKLVILSAGAVQSAALLLRSGLANRSDQVGRNFMNHNASAVIAFD
EEEEEEECCCEEEEECEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEC
PRYRNDSVYQKTFGFNDYYLSDGAGGPPLGNVQLLGRVSGAILKSNMRHVPEWLLNRIAG
CCCCCCCHHHHHCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
HTIDFYAMSEDLPSPESRVSVDGDRIILHWVRSNWKAHLMLVEKLKSALRAVGFPVVLSR
CEEEEEEECCCCCCCCCCEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHH
AFDRRTPSHQCGTARIGNDPATAPLDPYCRAYDHPNLYVVDASFLPTSAAVNPALTIAAQ
HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHH
ALRVADRIKREGFA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA