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The map label for this gene is yfjD [H]

Identifier: 23502875

GI number: 23502875

Start: 1952351

End: 1953658

Strand: Reverse

Name: yfjD [H]

Synonym: BR2027

Alternate gene names: 23502875

Gene position: 1953658-1952351 (Counterclockwise)

Preceding gene: 23502876

Following gene: 23502873

Centisome position: 92.69

GC content: 59.4

Gene sequence:

>1308_bases
ATGAGTATCGAGCTTTGGGTTCTGTGCGGCACTATTCTGTTCTGCGTCATTCTATCGGCTTTCTTTTCCGGTTCAGAAAC
GGCGCTGACAGCCGCCTCGCGCGCCCGGATGCTTACGCTGGAACAGCACGGCGATGCGCGGGCGAGCGTCGTGCAGCGCC
TGATCGGCAAACGTGACCGGCTGATTGGCGTGCTGCTGATCGGCAATAACCTTGCCAATATTCTCGCGTCCTCGATCGCG
ACCACCATGTTCCTGACCTTTTTCGGTGACGCGGGCGTGGCCTACGCCACACTGGCAATGACGGTCATTCTGGTCATTTT
CGCGGAAGTGCTGCCGAAATCCTGGGCCATTTCAAGCCCGGACCGTTTTTCGCTCAATGTTGCCCGTGGCGTGTCGCTGG
TGGTGCTCGTGCTGGGGCCGCTTTCTGCGGCTGTGAACTGGATCGTGCGGGTGATCCTGCGGCTGTTCGGCATCAATCTT
GCCGTCGGGCGCTCCATGCTCAGCCCGCAGGAAGAATTACGCGGGGCTGTCGAGGTGCTGCATCGCGACAAGTCGCTCAT
CAAGGAGGACCGCGATCAGCTCGGCGGTCTTCTCGATCTGAAAGAGCTTGAGGTCAGCGACGTCATGGTGCACCGCACCG
CGATGGGCACCATCAATGCCGATACGCCCGCAGACCAGATCGTGGGCGAGATCCTGGCAAGCCCGCATACGCGCGTTCCC
GTCTGGCGCGACGATATCGACAATATCATCGGCATCATCCACACCAAGGACCTGCTGAGGGCGCTCTACGAAGTAGACAA
TGATTTTACGCGCATCGACATCATGAAAGTTGCGCGCAAGCCGTGGTTCGTACCCGATACGACCACCTTGCAGGACCAGC
TCGATGCGTTCCTGCGGCGCAAGGCGCATATTGCCATTGTCGTGGACGAATATGGTGACGTGCAGGGGCTGGTCACGCTC
GAAGATATTCTGGAAGAAATCGTCGGCGATATTTCCGACGAGCATGATATCGATATGCAGGGCCTGCGCCTGCAACCGGA
CGGTTCGGCCATCGTGGACGGTTCGCTGCCGATCCGCGATATCAACCGCGCGCTGGACTGGAACCTGCCGGATGAAGAGG
CGACCACGATTGCCGGTCTGGTGATACACGAAACCCAGACCATTCCCGAAGTGAAGCAGGCCTTCACCTTTCACGGCAAG
CGCTTCACGGTGCTGAAAAAGGAAAAGAACCGGCTGACGCGGCTGCGCATCGTGCCGCTCGATGCAGACGGAAAACCGGC
GCAGATTTCAGCCGCCGGGCGCGCATAA

Upstream 100 bases:

>100_bases
GCTGGAATTTCTGAAAGAGCGCCTCGCCATAGCTTAGAGCGGAGATTTGCTGGAACCACTCTAACTATTTGTTCTGTGAA
AATTCTAGGGGAACACGGGA

Downstream 100 bases:

>100_bases
GCTATTTGCCGCCCGGATGATTGCTCAGCCCCGCGCTGCTTCTCCGGGGGCGGAAGGTTCCAGTGCCAGCGCGTGAACGC
CGCTTTCCAGTTCCTCTTTC

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSIELWVLCGTILFCVILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDRLIGVLLIGNNLANILASSIA
TTMFLTFFGDAGVAYATLAMTVILVIFAEVLPKSWAISSPDRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINL
AVGRSMLSPQEELRGAVEVLHRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRVP
VWRDDIDNIIGIIHTKDLLRALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFLRRKAHIAIVVDEYGDVQGLVTL
EDILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPIRDINRALDWNLPDEEATTIAGLVIHETQTIPEVKQAFTFHGK
RFTVLKKEKNRLTRLRIVPLDADGKPAQISAAGRA

Sequences:

>Translated_435_residues
MSIELWVLCGTILFCVILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDRLIGVLLIGNNLANILASSIA
TTMFLTFFGDAGVAYATLAMTVILVIFAEVLPKSWAISSPDRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINL
AVGRSMLSPQEELRGAVEVLHRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRVP
VWRDDIDNIIGIIHTKDLLRALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFLRRKAHIAIVVDEYGDVQGLVTL
EDILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPIRDINRALDWNLPDEEATTIAGLVIHETQTIPEVKQAFTFHGK
RFTVLKKEKNRLTRLRIVPLDADGKPAQISAAGRA
>Mature_434_residues
SIELWVLCGTILFCVILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDRLIGVLLIGNNLANILASSIAT
TMFLTFFGDAGVAYATLAMTVILVIFAEVLPKSWAISSPDRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINLA
VGRSMLSPQEELRGAVEVLHRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRVPV
WRDDIDNIIGIIHTKDLLRALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFLRRKAHIAIVVDEYGDVQGLVTLE
DILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPIRDINRALDWNLPDEEATTIAGLVIHETQTIPEVKQAFTFHGKR
FTVLKKEKNRLTRLRIVPLDADGKPAQISAAGRA

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=397, Percent_Identity=27.455919395466, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI94681046, Length=346, Percent_Identity=28.3236994219653, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI40068053, Length=346, Percent_Identity=27.7456647398844, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI40068055, Length=346, Percent_Identity=27.7456647398844, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI145693175, Length=415, Percent_Identity=35.1807228915663, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1790664, Length=431, Percent_Identity=24.5939675174014, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786879, Length=243, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI87082033, Length=241, Percent_Identity=30.2904564315353, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788119, Length=350, Percent_Identity=27.4285714285714, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17539402, Length=354, Percent_Identity=25.7062146892655, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6324512, Length=363, Percent_Identity=26.7217630853994, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47885; Mature: 47754

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIELWVLCGTILFCVILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDR
CCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHCCCHHHHHHHHHHCCCCC
LIGVLLIGNNLANILASSIATTMFLTFFGDAGVAYATLAMTVILVIFAEVLPKSWAISSP
EEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINLAVGRSMLSPQEELRGAVEVL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
HRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRVP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
VWRDDIDNIIGIIHTKDLLRALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFLRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
KAHIAIVVDEYGDVQGLVTLEDILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPIRD
CCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCCHHH
INRALDWNLPDEEATTIAGLVIHETQTIPEVKQAFTFHGKRFTVLKKEKNRLTRLRIVPL
HHHHHCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEE
DADGKPAQISAAGRA
CCCCCCCEECCCCCC
>Mature Secondary Structure 
SIELWVLCGTILFCVILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDR
CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHCCCHHHHHHHHHHCCCCC
LIGVLLIGNNLANILASSIATTMFLTFFGDAGVAYATLAMTVILVIFAEVLPKSWAISSP
EEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINLAVGRSMLSPQEELRGAVEVL
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHH
HRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRVP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
VWRDDIDNIIGIIHTKDLLRALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFLRR
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
KAHIAIVVDEYGDVQGLVTLEDILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPIRD
CCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEECCCCHHH
INRALDWNLPDEEATTIAGLVIHETQTIPEVKQAFTFHGKRFTVLKKEKNRLTRLRIVPL
HHHHHCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEE
DADGKPAQISAAGRA
CCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]