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The map label for this gene is lrrA [H]

Identifier: 23502801

GI number: 23502801

Start: 1882197

End: 1883180

Strand: Reverse

Name: lrrA [H]

Synonym: BR1951

Alternate gene names: 23502801

Gene position: 1883180-1882197 (Counterclockwise)

Preceding gene: 23502802

Following gene: 23502800

Centisome position: 89.34

GC content: 58.94

Gene sequence:

>984_bases
GTGAGCGAACAAAGCCAGATGGTGGTCAGCCGGTTGGGCTTCGACCTGCAATCCCTGGAAATATTCATTGCAGTCTGCAA
AACCGGCAGTATGACGGCTGCCGCCGCCTATAGCGACCTGACCCAGTCAGCCGTTTCGCGGCAGATAATCAATCTGGAAA
AGCGCCTTGGCGTCGGCCTGATCGAACGCGGCTCGCGCCCATTGAAACCGACGCTTGCCGGACAGAAGCTGATAAAGGCG
GCTGAACATCTGATTTCGGAAGCTGCGGCCATACCAACGCAATTGCAGGGCGCGGATACGCGCATGATCCCGCAATTCCG
GCTGGGGCTGATCGATTCCCTGTCGGACCCGCTCGTGCCGATGCTGATAAAGGCGCTACGTGATCGTGTCGGCTCGGTTT
CGGTGGCGACAGGCTTCATGGCGCCCCTGCGCCAACGCCTGCTCAAGCGCGAGCTCGATGCGGTGATTTCGGCTGATCCT
TTCGATGATGTCGACGGTTTTGAGCGATTCGAGCTGTTTCAGGAGCAATTCGTGGTGCTGGCCTCGCGCGGTGAACAGCC
GTTTGGCGACGAGGCCGAGTTTCGCAATTTTGCCGCTCGTTTTCCGATGATCCGGTCCGGCACATCTTCCGGCATTGCGC
AGCGGGTCGAGCAGCATTTCCGCCGCATGAAACTCGATGTGCCGCCTGCATTTTCGTGTGAAACGGTTGAATCTATCGTC
AGTCTTGTGGCTTCCGGGGTGGGGTGGTCCGTCCTGACACCTGTATGCGTTCGCAAATGTATCGCACTTGCGCCCGCCAT
TCAGGTTCTGCAATTTCCGGGCGCGGGCTTCTCGCGACGCATCTATCTCGTCGTCCGCCGGGGCGAGCTTGACCCCTTCG
CCAGGCAATTGTCGGTCATATGCCGGCGCATCATCCAGAAAAGCTATATCCCGCAGCTTGCGGCCCTCGCTCCCTGGATG
GTCGATGCCATTGCGCTTAATTGA

Upstream 100 bases:

>100_bases
CGATTTAGTATCTATTTCCGCCGCAATCGGGCGATTGACGATTACCGATATTTCTGATTAGTATGATTGAAATTCATAAT
TATAGCATGGGCGGCGGCTG

Downstream 100 bases:

>100_bases
TTTTCGACCATAGCCCGCCTGCCATCCTTCTTCCGACAATTATGTTCCGGTTCAAGATAGGTTGCCCGTCGAGCAGCCGA
TCTTGACCGCTATGGAAGAG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKA
AEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADP
FDDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAPWM
VDAIALN

Sequences:

>Translated_327_residues
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKA
AEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADP
FDDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAPWM
VDAIALN
>Mature_326_residues
SEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGLIERGSRPLKPTLAGQKLIKAA
EHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVPMLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADPF
DDVDGFERFELFQEQFVVLASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIVS
LVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVICRRIIQKSYIPQLAALAPWMV
DAIALN

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35960; Mature: 35829

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGL
CCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
IERGSRPLKPTLAGQKLIKAAEHLISEAAAIPTQLQGADTRMIPQFRLGLIDSLSDPLVP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHCCCCHHH
MLIKALRDRVGSVSVATGFMAPLRQRLLKRELDAVISADPFDDVDGFERFELFQEQFVVL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ASRGEQPFGDEAEFRNFAARFPMIRSGTSSGIAQRVEQHFRRMKLDVPPAFSCETVESIV
HHCCCCCCCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SLVASGVGWSVLTPVCVRKCIALAPAIQVLQFPGAGFSRRIYLVVRRGELDPFARQLSVI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHH
CRRIIQKSYIPQLAALAPWMVDAIALN
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEQSQMVVSRLGFDLQSLEIFIAVCKTGSMTAAAAYSDLTQSAVSRQIINLEKRLGVGL
CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH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HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8661945 [H]