| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23502709
Identifier: 23502709
GI number: 23502709
Start: 1786675
End: 1788114
Strand: Reverse
Name: 23502709
Synonym: BR1856
Alternate gene names: NA
Gene position: 1788114-1786675 (Counterclockwise)
Preceding gene: 23502710
Following gene: 23502708
Centisome position: 84.83
GC content: 50.42
Gene sequence:
>1440_bases ATGGCATCAAAGACTACCTTGAATGCGAAGAACCTTGAAGCACTTGGCGCTAAGCGCCTTGCTGAGCTATTGATTGAGAT CAGCACCGGGAATGCGAACCATAAGCGCTTGCTTCGTATGGAACTTGTCGGAAATTCGAGTGGTGCCGAGTTGGCAAGGG AAGTTCGTAAGCGTTTGGGCAGTATCGGACGTTCAAAAAGCTGGATTGACTGGCAGAAGGCAAAGTCCGTTAGGGCTGAT CTGGAAGCCCAGCGCAAATCTATTGCCGAGAAAATTGCGCCCACTGATCCGAATGAGGCGTTTGAACTGATCTGGCAGTT TCTATCGCTCGCAGACCCGATTTTTGAGCGTTCATGCGATGGAAGTGGCGCGTTGATCGAAAGCTTCCATGCCGCGTGCG AAGATGCTGGTCGCATTGCTGCAATGGCAAAAGTCCCCATTGACCGCTTGGTCGAGAAAATCTTCTCGGTCTTGCAGGAC AATGGATATGGTCAATATGATGCGCTGATTGAGGCAATGGCTCCGGCTCTCGGTGAGGCCGGCTTGCGAAAGCTTCAACG AGCCTTCGAAGCATGGGCTAAAGAGCCCCAGCCAAAAGTCGCAAGCAAAGACAAAGAGGTTATTGCTTGGAGTAGCGATG GCCCTGTTTACCGCGATCAGCTTTATGCCAGCGGTAAGTCGATCACGGTCAAAGTTGTGCTTCAGCAGGTCGCCGATGCT CTTGGCGATGTTGATCTCTATATTGAACAGCAATCTAAAGAATCACAGACGTTCGCTACAGTCACCACAGATATCGCTCG GAGGCTTTTAGCCGCTGGTCGCGCGGAAGACGCATTAACCGCTCTGGAGAAAACAAAATTCGATAGCTGTCGGGAAATCC CTTTTGAATGGCAAATTTTGCGTGCTGAGGTGCTGGAATCTCTCGGACGTGCAGAAGAGGCGCAACAGTTTCGGTGGAAG AGTTTCGAGCAGAATCTCAATGATGAGTTGCTACGGGAATATGTGAAGCGACTTCCCGATTTTGATGACGTTGAAGCTGA AGAAAAGGCATTTGCATTTGTCCGAGCCGTCGCCGATGCAAACCATGCACTCTATTTCTTCCTTCAATATCCATCACTTA GTGAAGCGTCTAAGCTGGTGGTCAGTCGAGCAAGTGAGATGGATGGCGATCATTATGAGCTGATGTCTGATGCCGCAGAG AAGCTATCGGCCAAATTCCCTTTGGCCGCGACTATTCTGTTACGCGCAATGATAGATTTCACGCTCAATAACGCTCGCTC AAGTCGTTACAAGCACGCAGCACGGCATTTGCTTGAGTGTGGTGCTCTGTCCCGTAGCATCGAAGATTATCATTCCTTCG CGCCGCATGAGGCTTATATTGCTGATCTCCGAAAGATGCACGGGAGGAAACATGGCTTCTGGCCGCTTGTAGATCGGTGA
Upstream 100 bases:
>100_bases TTGACCAAGGCAGGTTCATTCGCAAGGCTTTTTCTGGCCCTATCCATTCTTGCACCATTTGTTTTTGCGGCTATTGTCGA CGCGAAACAAGAGGTGATTG
Downstream 100 bases:
>100_bases ATAAAATAAGGTGTGAATTAGACTATAATTCCTGAGGATCTGTCGCAAATTATTCAGATCTTCTGCGCTATGCGTCTGGG CTATGCATGGTAGAGGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLGSIGRSKSWIDWQKAKSVRAD LEAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCDGSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQD NGYGQYDALIEAMAPALGEAGLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADA LGDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQILRAEVLESLGRAEEAQQFRWK SFEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADANHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAE KLSAKFPLAATILLRAMIDFTLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR
Sequences:
>Translated_479_residues MASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLGSIGRSKSWIDWQKAKSVRAD LEAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCDGSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQD NGYGQYDALIEAMAPALGEAGLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADA LGDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQILRAEVLESLGRAEEAQQFRWK SFEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADANHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAE KLSAKFPLAATILLRAMIDFTLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR >Mature_478_residues ASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLGSIGRSKSWIDWQKAKSVRADL EAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCDGSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQDN GYGQYDALIEAMAPALGEAGLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADAL GDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQILRAEVLESLGRAEEAQQFRWKS FEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADANHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAEK LSAKFPLAATILLRAMIDFTLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53671; Mature: 53540
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLG CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHCCCCCCHHHHHHHHHHHHH SIGRSKSWIDWQKAKSVRADLEAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC GSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQDNGYGQYDALIEAMAPALGEA CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADA HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHH LGDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQIL HCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RAEVLESLGRAEEAQQFRWKSFEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADA HHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC NHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAEKLSAKFPLAATILLRAMIDF CCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure ASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLG CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHCCCCCCHHHHHHHHHHHHH SIGRSKSWIDWQKAKSVRADLEAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC GSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQDNGYGQYDALIEAMAPALGEA CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADA HHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHH LGDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQIL HCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RAEVLESLGRAEEAQQFRWKSFEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADA HHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC NHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAEKLSAKFPLAATILLRAMIDF CCEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA