| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is yxiO [H]
Identifier: 23502670
GI number: 23502670
Start: 1748713
End: 1750080
Strand: Reverse
Name: yxiO [H]
Synonym: BR1817
Alternate gene names: 23502670
Gene position: 1750080-1748713 (Counterclockwise)
Preceding gene: 23502672
Following gene: 23502665
Centisome position: 83.03
GC content: 58.55
Gene sequence:
>1368_bases ATGGCGCCCCGCCGCCATGCCGCGCGTCGCGGCGTATGGGGATGGATTTTCTTCGATTGGGCGGCACAGCCCTTTTTCAC GGTTGTAACCACATTCATTTTCGGCCCCTATTTCATTTCCCATGTCGCCGCCACGCCTGAAGAGGGGCAGATGGCGTGGG GATATGGTTTCGCGGTGGCGGGGTTGCTCATCGCCATTCTCTCGCCAATCCTCGGCTCGGTTGCGGATAAAACCGGTGCG CGTAAGCCCTGGATCGGCTTCTTTGCAGTTTTGAAAATCATTTGCCTGTCGCTTTTGTGGTTTGCGGTTCCGGGTGCAAA CCTGTTCTGGGTTCTGTGCGCTTTCGCCATCGCCATGGTGGCGGCAGAATTTTCCATCGTCTTCAACGATTCCATGATGC CGCGTCTGGTGGCGCGTGAAGATATCGGGCGCGTGTCGAATATCGCCTGGGGGCTTGGCTATCTTGGCGGCATGATCGTG CTGATTTTCGTGGTCTTTTGCCTTGCCGTATCGCCGGAAACAGGCCGGACGATCATCGGGATGAAGCCGCTCTTCGGCCT TGATCCGCAACTGGGCGAGGGCGCGCGCATCACCGGGCCTCTGGCCGCGCTCTGGTATTTCATTTTCATCCTGCCGATGT TTTTCTTCACGCCCGATGCGGCAAAGGGTGAGCCCTTGCGCACGGCGCTTCGCTCCGGCTTGAGCGAGTTGAAGGCGACA TTGGCGGAGGTGCGCCACCGTTCCGGCATTGTGCGCCTTCTTGCTGCGCGGATGATCTATCAGGATGGCGTCAATGCACT GCTGGCGCTGGGAGGCGGTTATGCTGCGGCCATGTTCCACTGGACGATTACCGAGATCGGGCTTTTCGGCATGATCCTCA ATGTCATGGCGATCATCAGTTGCCTCATCGCCAGCAGGCTCGATATGCGCTTCGGCTCCAAGAAGGTCGTGATCGGCGCG CTGGTGCTTCTGTTCTTCGCTTCACTTGGCATTATTTCGACAGCAAGGGACTATACGCTTTTTGGCCTCCTGCCCTTCAC GCTGGAAGGCGAGGGCAAGCTCTTCGGTACCGCCGCCGAGCATAGTTATCTGATCTATGGGCTGATGATCGGCGCGGCCT TTGGGCCGGTGCAGGCTTCCTCGCGGTCCTGGTTTGCGCGCAGTATCAAGCCGGAGGAATCGGGCCGCTATTTCGGCCTT TATGCGCTGGCTGGCCGCGCAACCAGCTTTATGGGGCCATTTCTGGTGGCCAGCATTACCGCCATCAGTGGTTCAGCGGC TCTTGGCATGTCGGTACTGCTGTTGTTTTTTGTAGCAGGCTTTGCGCTGACGCTGATTACGCCCTATCCGGCGGACCGTC TGATATGA
Upstream 100 bases:
>100_bases CAATTATTCATAAAATGCTTGCGTGTTTCCGGTCGGAGGCGGGTTCGTGCCTTTTCGGAAAGCGTCCGGCGGACAGGAGC AGGGATTGACCGAACAAGTG
Downstream 100 bases:
>100_bases CAAAGGCCCCGAAACATATGTTCCGGGGCCTTTGCTTTATATGTTCCGATCAGTGGCGGAAGTGGCGCATCCCCGTCATG ACCATGGCGATGCCATGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAPRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMAWGYGFAVAGLLIAILSPILGSVADKTGA RKPWIGFFAVLKIICLSLLWFAVPGANLFWVLCAFAIAMVAAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIV LIFVVFCLAVSPETGRTIIGMKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTALRSGLSELKAT LAEVRHRSGIVRLLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFGMILNVMAIISCLIASRLDMRFGSKKVVIGA LVLLFFASLGIISTARDYTLFGLLPFTLEGEGKLFGTAAEHSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGL YALAGRATSFMGPFLVASITAISGSAALGMSVLLLFFVAGFALTLITPYPADRLI
Sequences:
>Translated_455_residues MAPRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMAWGYGFAVAGLLIAILSPILGSVADKTGA RKPWIGFFAVLKIICLSLLWFAVPGANLFWVLCAFAIAMVAAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIV LIFVVFCLAVSPETGRTIIGMKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTALRSGLSELKAT LAEVRHRSGIVRLLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFGMILNVMAIISCLIASRLDMRFGSKKVVIGA LVLLFFASLGIISTARDYTLFGLLPFTLEGEGKLFGTAAEHSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGL YALAGRATSFMGPFLVASITAISGSAALGMSVLLLFFVAGFALTLITPYPADRLI >Mature_454_residues APRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMAWGYGFAVAGLLIAILSPILGSVADKTGAR KPWIGFFAVLKIICLSLLWFAVPGANLFWVLCAFAIAMVAAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIVL IFVVFCLAVSPETGRTIIGMKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTALRSGLSELKATL AEVRHRSGIVRLLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFGMILNVMAIISCLIASRLDMRFGSKKVVIGAL VLLFFASLGIISTARDYTLFGLLPFTLEGEGKLFGTAAEHSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGLY ALAGRATSFMGPFLVASITAISGSAALGMSVLLLFFVAGFALTLITPYPADRLI
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49221; Mature: 49090
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMAWGYGFAVA CCCCHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH GLLIAILSPILGSVADKTGARKPWIGFFAVLKIICLSLLWFAVPGANLFWVLCAFAIAMV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIVLIFVVFCLAVSPETGRTIIG HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE MKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTALRSGLSELKAT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LAEVRHRSGIVRLLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFGMILNVMAIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLIASRLDMRFGSKKVVIGALVLLFFASLGIISTARDYTLFGLLPFTLEGEGKLFGTAAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEECCC HSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGLYALAGRATSFMGPFLVASIT CHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH AISGSAALGMSVLLLFFVAGFALTLITPYPADRLI HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC >Mature Secondary Structure APRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMAWGYGFAVA CCCHHHHHCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH GLLIAILSPILGSVADKTGARKPWIGFFAVLKIICLSLLWFAVPGANLFWVLCAFAIAMV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH AAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIVLIFVVFCLAVSPETGRTIIG HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE MKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTALRSGLSELKAT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LAEVRHRSGIVRLLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFGMILNVMAIIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH CLIASRLDMRFGSKKVVIGALVLLFFASLGIISTARDYTLFGLLPFTLEGEGKLFGTAAE HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEECCC HSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGLYALAGRATSFMGPFLVASIT CHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH AISGSAALGMSVLLLFFVAGFALTLITPYPADRLI HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]