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The map label for this gene is nudL [H]

Identifier: 23502418

GI number: 23502418

Start: 1503183

End: 1503689

Strand: Reverse

Name: nudL [H]

Synonym: BR1554

Alternate gene names: 23502418

Gene position: 1503689-1503183 (Counterclockwise)

Preceding gene: 23502419

Following gene: 23502417

Centisome position: 71.34

GC content: 60.95

Gene sequence:

>507_bases
ATGGTGACGGCCAGAATGCGCGATGCCGCCGTGCTTGTTCCGGTGGTGGACCGGGGGGCGGAGGCAACGCTGCTGCTTAC
CCGGCGCACCGATACGCTGCGCAAACATTCCGGCCAGATCGCCTTTCCCGGAGGGGCCATCGACCCGGAAGACGGAACGG
CGGAACGGGCGGCACTTCGCGAGGCCAATGAGGAAATCGGGCTTGCCGCAGACCGTGCGGAGATCATCGGCAACCTGCCG
CGCTATCTCACCGGCAGCGGCTTTTCCATCACGCCTGTCCTGGCGGTGGTGAAAACGCCGTTCGATGTGCATCCCAATCC
GGACGAAGTCGCCGATATTTTTGAAGTGCCGCTTTCCTTCCTGATGAATCCGGCCAATCATCGCCGCGAAAGCAGGCTGT
TCAACGGCAAGGAACGCTTCTATTACGCCATGCCCTATCACGAGCGATTCATCTGGGGGGCAACCGCCGGCATCATTCGC
GGACTTTATGAAAGGCTCTACGTTTGA

Upstream 100 bases:

>100_bases
CTTTTCAGCCGGTGATTTTGCCGAGCGGGTGCGGCAATGGCGGCCCGACCACGAGGAGCTGACTGGCGATCATGCGCTTA
ACCCCGATGTCTCACAGGCG

Downstream 100 bases:

>100_bases
GCGAGAGTATAAATATTTCCGGCAAGGCAGATTGGCTGAATGCGAAGCCGTTGCAGGCGCTTTTCACGGCATTGAACCGC
GATGGCGGCGAGGCGCGCGT

Product: MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTAERAALREANEEIGLAADRAEIIGNLP
RYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSFLMNPANHRRESRLFNGKERFYYAMPYHERFIWGATAGIIR
GLYERLYV

Sequences:

>Translated_168_residues
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTAERAALREANEEIGLAADRAEIIGNLP
RYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSFLMNPANHRRESRLFNGKERFYYAMPYHERFIWGATAGIIR
GLYERLYV
>Mature_168_residues
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTAERAALREANEEIGLAADRAEIIGNLP
RYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSFLMNPANHRRESRLFNGKERFYYAMPYHERFIWGATAGIIR
GLYERLYV

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=118, Percent_Identity=38.9830508474576, Blast_Score=94, Evalue=4e-20,
Organism=Homo sapiens, GI32469515, Length=116, Percent_Identity=38.7931034482759, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788115, Length=160, Percent_Identity=40.625, Blast_Score=100, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17510677, Length=124, Percent_Identity=38.7096774193548, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17536993, Length=140, Percent_Identity=35, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6323180, Length=145, Percent_Identity=31.7241379310345, Blast_Score=69, Evalue=4e-13,
Organism=Drosophila melanogaster, GI18859683, Length=153, Percent_Identity=36.6013071895425, Blast_Score=77, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 18698; Mature: 18698

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTAERAALR
CCCCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
EANEEIGLAADRAEIIGNLPRYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSF
HHHHHCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LMNPANHRRESRLFNGKERFYYAMPYHERFIWGATAGIIRGLYERLYV
HCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTARMRDAAVLVPVVDRGAEATLLLTRRTDTLRKHSGQIAFPGGAIDPEDGTAERAALR
CCCCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
EANEEIGLAADRAEIIGNLPRYLTGSGFSITPVLAVVKTPFDVHPNPDEVADIFEVPLSF
HHHHHCCCCHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LMNPANHRRESRLFNGKERFYYAMPYHERFIWGATAGIIRGLYERLYV
HCCCHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA