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The map label for this gene is yhhJ [H]

Identifier: 23502221

GI number: 23502221

Start: 1309405

End: 1310517

Strand: Reverse

Name: yhhJ [H]

Synonym: BR1349

Alternate gene names: 23502221

Gene position: 1310517-1309405 (Counterclockwise)

Preceding gene: 23502222

Following gene: 23502220

Centisome position: 62.17

GC content: 57.59

Gene sequence:

>1113_bases
ATGAGGATTGCCAATATATTCCGGCTCGGCATCAAGGAACTGCGCGGCCTCATGCGCGATCCGATGCTTCTGATCCTGAT
TGTCTATGCTTTCACGCTGGCCATTTATACGGCGGCGAAAGCCATGCCGGAAACGCTGAACAATGCGGCAATCGCCATTG
TCGATGAGGACCAGTCACCGGTTTCGGGCCGGATTACGACCGCGTTCTATCCGCCCTATTTCGTGCCGCCGAAGCTTATC
TCCTCTTATGAGATGGATAATCGCATGGATGAGGGGCTGGATACGTTTGCACTCAATATTCCGCCGGATTTTCAGCGCGA
CCTTCTGGCCGGGCGCGCGCCGACCATCCAGCTCAATGTGGATGCAACGCGCATGAGCCAGGCCTTTACGGGCGGCGGCT
ATGTGCAATCCATCGTGGCGGGGGAGGTGAGTGAATTCCTCAATCACTACCGGGGCAGTGCGCCCGCGCCGGTCGATCTG
AATTTGCGGGCGCGCTTCAATCAGGAATTGAACAAGGGATGGTTCGGGGCGATTACAAATGTGATCTCTTCAGTCACGAT
GCTTTCGATTATCCTGACAGGTGCGGCGCTGATCCGCGAGCGTGAACATGGAACCATCGAACATCTGCTGGTGATGCCGG
TAACGCCGATTGAGATCATGATCAGCAAGGTCTGGTCCATGGGGCTGGTCGTGCTGGTTGCCTCGGCCTTTGCGCTGACC
TTCGTGGTGCAGGGGCTGTTGTCCGTGCCGATCAACGGGTCGATCCTGCTCTTTCTTGCAGGGGCTGCGCTGCAACTTTT
CGCAACGACGAGCCTTGGCATTTTTTTGGCAACCGTTGCCGGGTCCATGCCGCAGTTCGGCCTGCTCCTGATGCTGATCC
TGCTGCCATTGCAGGTCTTGTCCGGTGCGACCACGCCGCGCGAAAGCATGCCGGAAATCATTCAGACGATCATGCTTGCA
GCGCCCAACACGCATTTCGTCATTCTGGCGCAATCCATTCTTTTTCGGGGGGCGGGGCTTGGCGTGGTCTGGCCGCAGTT
CCTGGCGCTGTTCGTCATCGGGTCTGTACTTTTCCTGTTTGCCTTGCGGCGCTTCCGCGCTTTCCTGCGATAG

Upstream 100 bases:

>100_bases
GATTTCAGCGCGCTTGCGGGTTCCTTCCTGCCGCTGCTGATCGCTATTCCGGTATTGATGCTGCTTGGCATCGTTCTTCT
GAAAAAACAGGCGAGCTGAG

Downstream 100 bases:

>100_bases
GGAAAGCGTTGAAAAACAAAGAGATAGAGCGGGATGGTGACCTGATTTAATGTCATCACGCTCTATCGCGCGCTTTGGCG
CAGTTGCGAATCCTCAATCA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MRIANIFRLGIKELRGLMRDPMLLILIVYAFTLAIYTAAKAMPETLNNAAIAIVDEDQSPVSGRITTAFYPPYFVPPKLI
SSYEMDNRMDEGLDTFALNIPPDFQRDLLAGRAPTIQLNVDATRMSQAFTGGGYVQSIVAGEVSEFLNHYRGSAPAPVDL
NLRARFNQELNKGWFGAITNVISSVTMLSIILTGAALIREREHGTIEHLLVMPVTPIEIMISKVWSMGLVVLVASAFALT
FVVQGLLSVPINGSILLFLAGAALQLFATTSLGIFLATVAGSMPQFGLLLMLILLPLQVLSGATTPRESMPEIIQTIMLA
APNTHFVILAQSILFRGAGLGVVWPQFLALFVIGSVLFLFALRRFRAFLR

Sequences:

>Translated_370_residues
MRIANIFRLGIKELRGLMRDPMLLILIVYAFTLAIYTAAKAMPETLNNAAIAIVDEDQSPVSGRITTAFYPPYFVPPKLI
SSYEMDNRMDEGLDTFALNIPPDFQRDLLAGRAPTIQLNVDATRMSQAFTGGGYVQSIVAGEVSEFLNHYRGSAPAPVDL
NLRARFNQELNKGWFGAITNVISSVTMLSIILTGAALIREREHGTIEHLLVMPVTPIEIMISKVWSMGLVVLVASAFALT
FVVQGLLSVPINGSILLFLAGAALQLFATTSLGIFLATVAGSMPQFGLLLMLILLPLQVLSGATTPRESMPEIIQTIMLA
APNTHFVILAQSILFRGAGLGVVWPQFLALFVIGSVLFLFALRRFRAFLR
>Mature_370_residues
MRIANIFRLGIKELRGLMRDPMLLILIVYAFTLAIYTAAKAMPETLNNAAIAIVDEDQSPVSGRITTAFYPPYFVPPKLI
SSYEMDNRMDEGLDTFALNIPPDFQRDLLAGRAPTIQLNVDATRMSQAFTGGGYVQSIVAGEVSEFLNHYRGSAPAPVDL
NLRARFNQELNKGWFGAITNVISSVTMLSIILTGAALIREREHGTIEHLLVMPVTPIEIMISKVWSMGLVVLVASAFALT
FVVQGLLSVPINGSILLFLAGAALQLFATTSLGIFLATVAGSMPQFGLLLMLILLPLQVLSGATTPRESMPEIIQTIMLA
APNTHFVILAQSILFRGAGLGVVWPQFLALFVIGSVLFLFALRRFRAFLR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI226510979, Length=365, Percent_Identity=60.2739726027397, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1787010, Length=361, Percent_Identity=27.1468144044321, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI48994943, Length=362, Percent_Identity=26.2430939226519, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787011, Length=340, Percent_Identity=25.2941176470588, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40370; Mature: 40370

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIANIFRLGIKELRGLMRDPMLLILIVYAFTLAIYTAAKAMPETLNNAAIAIVDEDQSP
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
VSGRITTAFYPPYFVPPKLISSYEMDNRMDEGLDTFALNIPPDFQRDLLAGRAPTIQLNV
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCEEEEEC
DATRMSQAFTGGGYVQSIVAGEVSEFLNHYRGSAPAPVDLNLRARFNQELNKGWFGAITN
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCHHHHHHH
VISSVTMLSIILTGAALIREREHGTIEHLLVMPVTPIEIMISKVWSMGLVVLVASAFALT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FVVQGLLSVPINGSILLFLAGAALQLFATTSLGIFLATVAGSMPQFGLLLMLILLPLQVL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SGATTPRESMPEIIQTIMLAAPNTHFVILAQSILFRGAGLGVVWPQFLALFVIGSVLFLF
CCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALRRFRAFLR
HHHHHHHHHC
>Mature Secondary Structure
MRIANIFRLGIKELRGLMRDPMLLILIVYAFTLAIYTAAKAMPETLNNAAIAIVDEDQSP
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
VSGRITTAFYPPYFVPPKLISSYEMDNRMDEGLDTFALNIPPDFQRDLLAGRAPTIQLNV
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCEEEEEC
DATRMSQAFTGGGYVQSIVAGEVSEFLNHYRGSAPAPVDLNLRARFNQELNKGWFGAITN
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCHHHHHHH
VISSVTMLSIILTGAALIREREHGTIEHLLVMPVTPIEIMISKVWSMGLVVLVASAFALT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FVVQGLLSVPINGSILLFLAGAALQLFATTSLGIFLATVAGSMPQFGLLLMLILLPLQVL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SGATTPRESMPEIIQTIMLAAPNTHFVILAQSILFRGAGLGVVWPQFLALFVIGSVLFLF
CCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ALRRFRAFLR
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8387990 [H]