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The map label for this gene is tsf

Identifier: 23502039

GI number: 23502039

Start: 1140421

End: 1141338

Strand: Reverse

Name: tsf

Synonym: BR1161

Alternate gene names: 23502039

Gene position: 1141338-1140421 (Counterclockwise)

Preceding gene: 23502040

Following gene: 161486695

Centisome position: 54.15

GC content: 59.69

Gene sequence:

>918_bases
ATGAGCATTTCCGCATCTCTCGTCAAAGAACTCCGCGACCTCACCGGCGCTGGCATGATGGACTGCAAGGCGGCTCTCGC
TGCTACCGAGGGCAAGATCGAAGCTGCCGTTGACTGGCTGCGCGCCAAGGGCATCGCCAAGGCCGACAAGAAGGCTGGCC
GCACGGCTGCCGAAGGTCTGGTCGGTGTTGCTGCTTCCGGCAACAAGGCCGTTGTCGTTGAAGTCAATTCCGAAACCGAC
TTCGTTGCCCGCAACGACGCTTTCCAGGAACTCGTTCGCAAGATCGCGCAGGCTGCGCTTTCGACCGATGGTTCGAGCGA
AGCCGTGGCCAACGCCAATGTGGACGGCAAGACCGTTACCGAAGCTGCCAAGGACGCTGTTGCCACCATCGGTGAAAACA
TCAGCTTCCGCCGTTCGGCCGCACTCTCGGTTCCGCAGGGCGTTGTTGCGACCTATATCCACAATGGCGTTGCCGATGGC
CTTGGCAAGCTTGGCGTTCTGGTTGCCATTGAAACGGCTGGCGATGCAGAAGCCGCGCAGGCTTTCGGACGTCAGGTCGC
CATGCATGTTGCCGCCGTCAATCCGCTGGCGCTGACCTCTGCCGACGTGAACCCGGAAGCTGCCGAACGCGAAAAGGCAA
TCTTCATCGATCAGGCCCGCCAGTCGGGCAAGCCGGACAACATCATCGAAAAGATGGTGGAAGGCCGTATGCGCAAGTTC
TACGAAGAAGTTGTTCTTCTCTCGCAGGCTTTCGTCATCAATCCGGACCTGACGGTTGAAGCCGCTCTCAAGGATGCCGA
AAAGGCTATCGGTGCACCGGCCAAGATCACCGGCTTTGCCCGTATTGCTCTGGGTGAAGGCATCGAAAAGGAAGAAAGCG
ACTTCGCAGCCGAAGTGGCCGCAGCCGCCAAGGGCTGA

Upstream 100 bases:

>100_bases
CAGGGAGATCCTGCGGATAAATCATGATCCCGCACTAAAGCGCCGGTTAAAAGTTGGCACACCCATCCGGTGTGCCTTCG
CTTTCATGAAAGGCGACACA

Downstream 100 bases:

>100_bases
TCGGTTTTCCAGCGCATCTTGCCGCGAAAACCGGTTTTCGCTTTTCGGGATGCGTCCATTGCCTGAAAAGCCTCTTGATT
ATGAAGGGCATCGCGTGACA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSISASLVKELRDLTGAGMMDCKAALAATEGKIEAAVDWLRAKGIAKADKKAGRTAAEGLVGVAASGNKAVVVEVNSETD
FVARNDAFQELVRKIAQAALSTDGSSEAVANANVDGKTVTEAAKDAVATIGENISFRRSAALSVPQGVVATYIHNGVADG
LGKLGVLVAIETAGDAEAAQAFGRQVAMHVAAVNPLALTSADVNPEAAEREKAIFIDQARQSGKPDNIIEKMVEGRMRKF
YEEVVLLSQAFVINPDLTVEAALKDAEKAIGAPAKITGFARIALGEGIEKEESDFAAEVAAAAKG

Sequences:

>Translated_305_residues
MSISASLVKELRDLTGAGMMDCKAALAATEGKIEAAVDWLRAKGIAKADKKAGRTAAEGLVGVAASGNKAVVVEVNSETD
FVARNDAFQELVRKIAQAALSTDGSSEAVANANVDGKTVTEAAKDAVATIGENISFRRSAALSVPQGVVATYIHNGVADG
LGKLGVLVAIETAGDAEAAQAFGRQVAMHVAAVNPLALTSADVNPEAAEREKAIFIDQARQSGKPDNIIEKMVEGRMRKF
YEEVVLLSQAFVINPDLTVEAALKDAEKAIGAPAKITGFARIALGEGIEKEESDFAAEVAAAAKG
>Mature_304_residues
SISASLVKELRDLTGAGMMDCKAALAATEGKIEAAVDWLRAKGIAKADKKAGRTAAEGLVGVAASGNKAVVVEVNSETDF
VARNDAFQELVRKIAQAALSTDGSSEAVANANVDGKTVTEAAKDAVATIGENISFRRSAALSVPQGVVATYIHNGVADGL
GKLGVLVAIETAGDAEAAQAFGRQVAMHVAAVNPLALTSADVNPEAAEREKAIFIDQARQSGKPDNIIEKMVEGRMRKFY
EEVVLLSQAFVINPDLTVEAALKDAEKAIGAPAKITGFARIALGEGIEKEESDFAAEVAAAAKG

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=230, Percent_Identity=33.4782608695652, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI291084500, Length=251, Percent_Identity=31.4741035856574, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI291084502, Length=97, Percent_Identity=44.3298969072165, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI291084498, Length=97, Percent_Identity=44.3298969072165, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1786366, Length=302, Percent_Identity=45.6953642384106, Blast_Score=218, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17561440, Length=300, Percent_Identity=29, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI19921466, Length=310, Percent_Identity=25.8064516129032, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_BRUA1 (B2S610)

Other databases:

- EMBL:   CP000887
- RefSeq:   YP_001935081.1
- ProteinModelPortal:   B2S610
- SMR:   B2S610
- GeneID:   6328649
- GenomeReviews:   CP000887_GR
- KEGG:   bmc:BAbS19_I11000
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 31491; Mature: 31360

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISASLVKELRDLTGAGMMDCKAALAATEGKIEAAVDWLRAKGIAKADKKAGRTAAEGL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCC
VGVAASGNKAVVVEVNSETDFVARNDAFQELVRKIAQAALSTDGSSEAVANANVDGKTVT
EEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHH
EAAKDAVATIGENISFRRSAALSVPQGVVATYIHNGVADGLGKLGVLVAIETAGDAEAAQ
HHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHH
AFGRQVAMHVAAVNPLALTSADVNPEAAEREKAIFIDQARQSGKPDNIIEKMVEGRMRKF
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEEVVLLSQAFVINPDLTVEAALKDAEKAIGAPAKITGFARIALGEGIEKEESDFAAEVA
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAAKG
HHCCC
>Mature Secondary Structure 
SISASLVKELRDLTGAGMMDCKAALAATEGKIEAAVDWLRAKGIAKADKKAGRTAAEGL
CCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCHHHHCC
VGVAASGNKAVVVEVNSETDFVARNDAFQELVRKIAQAALSTDGSSEAVANANVDGKTVT
EEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHH
EAAKDAVATIGENISFRRSAALSVPQGVVATYIHNGVADGLGKLGVLVAIETAGDAEAAQ
HHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHH
AFGRQVAMHVAAVNPLALTSADVNPEAAEREKAIFIDQARQSGKPDNIIEKMVEGRMRKF
HHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEEVVLLSQAFVINPDLTVEAALKDAEKAIGAPAKITGFARIALGEGIEKEESDFAAEVA
HHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
AAAKG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA