Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 23501992

GI number: 23501992

Start: 1089321

End: 1090697

Strand: Reverse

Name: trkA [H]

Synonym: BR1114

Alternate gene names: 23501992

Gene position: 1090697-1089321 (Counterclockwise)

Preceding gene: 23501993

Following gene: 23501991

Centisome position: 51.75

GC content: 56.06

Gene sequence:

>1377_bases
ATGCGGGTAATTGTTTGCGGAGCAGGGCAGGTCGGCTATGGTATTGCCGAACGGCTGGCTGCCGAGGAAAACGATGTATC
CGTCATTGATACATCCGCACGTGATATCGAGATCGTGCGCGATACGCTGGATGTTCGCGGTTTTATAGGCCATGGCTCAC
AGCCCGATGTGCTGGCGGCCGCAGGGGCTGACGAAGCGGACATGATTATCGCGGTCACGCTTTCCGACGAGGTCAATATG
GTGGCCTGTCAGGTGGCGCATTCCGTGTTCAACGTGCCGACCAAGATTGCCCGTATTCGCGCCCAATCCTATCTGAAGGC
GGAATATCAGGACCTGTTCCTGCGTGAAAACCTGCCCATTGACGTCATTATCTCGCCGGAAATTGAAGTGGGCGAAGTGG
TGCTGCGGCGTATCGCGTTGCAAGGCGCGACGGATGTGCTGCGCTTTGCCGATGACAAGATTATCGGACTTGCCATTGAA
TGCCTTGATGAATGCCCTGTCATCAATACGCCGCTCAGGCAGCTGACCGAACTTTTTCCTGACCTTACCGCCACCGTGGT
TGGCGTGGTGCGCAATGACAGCCTTTTCATCCCGCGTTCTTCGGACGAATTGAATGCCGGAGACCTTGCCTATGTGGTTA
CGACACGGGAACAGGTGCGCCGCACGCTGGGCCTGTTCGGGCATGAAAAGCCGGAAGCAAATCGCATCGTCATCGCGGGC
GGCGGCAATATCGGGCTTTACGTGGCAAAAGCCATTGAAGAGCGTGAATGGCACACCCGCGTAAAGATGATCGAGAGCGA
GCATGAGCGCGCCTTCGCTATTGCCGATCAGCTCAAGCGCACGATGGTTCTGCATGGCAGCGCGCTAGACCAGAATCTCC
TGCAGGAAGCAGATGTGCAGGACGCCGATCTGATGGTGACGCTCACCAATCAGGATCAGGTGAATATCCTGTCCAGCATC
ATGGCGAAGCGGCTTGGCTGCAAGACCAATATGGCGCTGCTCAATACGGTGGCCTATCAGGACTTTACCCATATGGTAGG
GATCGACGCCTATATAAATCCGAAGGCTGTCACCATCTCGAAAATCCTCCAGCATGTGCGTCGTGGCCGTATTAGCGCAG
TCTATAGCATCTATCGCGACAGGGCGGAACTTATCGAGGCGGAAGCCCTGGAAACCTCCTCGCTGGTCGGTGCGCCATTG
CGTGATCTCGATCTGCCGGAGGGCTTGCGAATCGGAGCCATCTACCGCGACGGAGAGATGATCCGTCCAAACGGTGACGT
GCGGATAAAGCCCAGGGACCGGGTTGTCATTTTTGCAACTGCGGATGCGGTAAAACATGTGGAGCAGATGTTCCGCGTCA
GTCTTGAGTTCTTCTGA

Upstream 100 bases:

>100_bases
TATCTCGCGCACGGCTGAATTCGTCGGGATGGAACGGTCTGCGCTCCATCGCAAGCTGAAGTCTCTCGGCGTATAATATA
GCAGGGCGAACGGAGCGGAT

Downstream 100 bases:

>100_bases
ACACGATTTCGTGCTAGCTTAATCCTGGGTGAGGATTAGGGGACTCGCATGGATATCTGTACGTTCTGGTATGGCTCGCG
TTTGCGGGACGTCGATCGCA

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MRVIVCGAGQVGYGIAERLAAEENDVSVIDTSARDIEIVRDTLDVRGFIGHGSQPDVLAAAGADEADMIIAVTLSDEVNM
VACQVAHSVFNVPTKIARIRAQSYLKAEYQDLFLRENLPIDVIISPEIEVGEVVLRRIALQGATDVLRFADDKIIGLAIE
CLDECPVINTPLRQLTELFPDLTATVVGVVRNDSLFIPRSSDELNAGDLAYVVTTREQVRRTLGLFGHEKPEANRIVIAG
GGNIGLYVAKAIEEREWHTRVKMIESEHERAFAIADQLKRTMVLHGSALDQNLLQEADVQDADLMVTLTNQDQVNILSSI
MAKRLGCKTNMALLNTVAYQDFTHMVGIDAYINPKAVTISKILQHVRRGRISAVYSIYRDRAELIEAEALETSSLVGAPL
RDLDLPEGLRIGAIYRDGEMIRPNGDVRIKPRDRVVIFATADAVKHVEQMFRVSLEFF

Sequences:

>Translated_458_residues
MRVIVCGAGQVGYGIAERLAAEENDVSVIDTSARDIEIVRDTLDVRGFIGHGSQPDVLAAAGADEADMIIAVTLSDEVNM
VACQVAHSVFNVPTKIARIRAQSYLKAEYQDLFLRENLPIDVIISPEIEVGEVVLRRIALQGATDVLRFADDKIIGLAIE
CLDECPVINTPLRQLTELFPDLTATVVGVVRNDSLFIPRSSDELNAGDLAYVVTTREQVRRTLGLFGHEKPEANRIVIAG
GGNIGLYVAKAIEEREWHTRVKMIESEHERAFAIADQLKRTMVLHGSALDQNLLQEADVQDADLMVTLTNQDQVNILSSI
MAKRLGCKTNMALLNTVAYQDFTHMVGIDAYINPKAVTISKILQHVRRGRISAVYSIYRDRAELIEAEALETSSLVGAPL
RDLDLPEGLRIGAIYRDGEMIRPNGDVRIKPRDRVVIFATADAVKHVEQMFRVSLEFF
>Mature_458_residues
MRVIVCGAGQVGYGIAERLAAEENDVSVIDTSARDIEIVRDTLDVRGFIGHGSQPDVLAAAGADEADMIIAVTLSDEVNM
VACQVAHSVFNVPTKIARIRAQSYLKAEYQDLFLRENLPIDVIISPEIEVGEVVLRRIALQGATDVLRFADDKIIGLAIE
CLDECPVINTPLRQLTELFPDLTATVVGVVRNDSLFIPRSSDELNAGDLAYVVTTREQVRRTLGLFGHEKPEANRIVIAG
GGNIGLYVAKAIEEREWHTRVKMIESEHERAFAIADQLKRTMVLHGSALDQNLLQEADVQDADLMVTLTNQDQVNILSSI
MAKRLGCKTNMALLNTVAYQDFTHMVGIDAYINPKAVTISKILQHVRRGRISAVYSIYRDRAELIEAEALETSSLVGAPL
RDLDLPEGLRIGAIYRDGEMIRPNGDVRIKPRDRVVIFATADAVKHVEQMFRVSLEFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=462, Percent_Identity=38.5281385281385, Blast_Score=308, Evalue=6e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 50626; Mature: 50626

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIVCGAGQVGYGIAERLAAEENDVSVIDTSARDIEIVRDTLDVRGFIGHGSQPDVLAA
CEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCEEECCCCCCCEEEE
AGADEADMIIAVTLSDEVNMVACQVAHSVFNVPTKIARIRAQSYLKAEYQDLFLRENLPI
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
DVIISPEIEVGEVVLRRIALQGATDVLRFADDKIIGLAIECLDECPVINTPLRQLTELFP
EEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCC
DLTATVVGVVRNDSLFIPRSSDELNAGDLAYVVTTREQVRRTLGLFGHEKPEANRIVIAG
CHHHHHHHEEECCCEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCEEEEEE
GGNIGLYVAKAIEEREWHTRVKMIESEHERAFAIADQLKRTMVLHGSALDQNLLQEADVQ
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCC
DADLMVTLTNQDQVNILSSIMAKRLGCKTNMALLNTVAYQDFTHMVGIDAYINPKAVTIS
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECEEECCCEEEHH
KILQHVRRGRISAVYSIYRDRAELIEAEALETSSLVGAPLRDLDLPEGLRIGAIYRDGEM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCEE
IRPNGDVRIKPRDRVVIFATADAVKHVEQMFRVSLEFF
ECCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVIVCGAGQVGYGIAERLAAEENDVSVIDTSARDIEIVRDTLDVRGFIGHGSQPDVLAA
CEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCEEECCCCCCCEEEE
AGADEADMIIAVTLSDEVNMVACQVAHSVFNVPTKIARIRAQSYLKAEYQDLFLRENLPI
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
DVIISPEIEVGEVVLRRIALQGATDVLRFADDKIIGLAIECLDECPVINTPLRQLTELFP
EEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCC
DLTATVVGVVRNDSLFIPRSSDELNAGDLAYVVTTREQVRRTLGLFGHEKPEANRIVIAG
CHHHHHHHEEECCCEEECCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCEEEEEE
GGNIGLYVAKAIEEREWHTRVKMIESEHERAFAIADQLKRTMVLHGSALDQNLLQEADVQ
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCC
DADLMVTLTNQDQVNILSSIMAKRLGCKTNMALLNTVAYQDFTHMVGIDAYINPKAVTIS
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECEEECCCEEEHH
KILQHVRRGRISAVYSIYRDRAELIEAEALETSSLVGAPLRDLDLPEGLRIGAIYRDGEM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEEEEEEECCEE
IRPNGDVRIKPRDRVVIFATADAVKHVEQMFRVSLEFF
ECCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]