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The map label for this gene is ylbA [H]

Identifier: 23501251

GI number: 23501251

Start: 355346

End: 356164

Strand: Reverse

Name: ylbA [H]

Synonym: BR0346

Alternate gene names: 23501251

Gene position: 356164-355346 (Counterclockwise)

Preceding gene: 23501252

Following gene: 23501245

Centisome position: 16.9

GC content: 59.83

Gene sequence:

>819_bases
ATGAGCCGCAATTATTATGCACCAACGGGCGGCCTGCCGCCGCAAACCCAGCTTCTCACCGACCGCGCCATGTTTACCGA
AGCCTATGCGGTTATTCCCAAAGGCACGTTCAGCGATATCGTGACGAGTTTCCTGCCCTTCTGGGAAAAGACACGGCTCT
GGGTGATTGCACGCCCTCTTTCGGGCTTCGCCGAGACTTTTTCGCAATATATCATGGAAGTGCAGCCGGGCGGCGGCAGT
GATCGTGCCGAGCTGGATGAAGGCGCGGAAGGCGTGCTTTTCGTGGTGGAAGGCGAAGTGAGCGTGACGGTGGCGGGCAA
AACCCACAGGCTGGACGAAGGCGGCTATGCCTATCTGCCGCCGAAAAGCGGCTGGCGGCTGCGCAATGAGGGGGCCACGA
CAGCGCGCTTCCACTGGATACGCAAGGCCTATGAATATGTGGACGGGCTGGATGTGCCGGAACCGCTTTTCCTCAACGAG
AAGGACATAGCGCCCTCCCCCATGCCGGACACCGGCGGCGCATGGGCAACGACACGCTTTGTTGACCCGAACGACCTGCG
CCACGACATGCATGTGACAGTCGTGACCTTCGAGCCGGGGGGCGTGATTCCCTTTGCCGAAACCCATGTGATGGAACACG
GACTTTATGTGCTGGAAGGCAAGGCCGTCTATCGGCTCAACCAGGACTGGGTGGAAGTGGAGGCAGGCGATTTCATGTGG
CTGCGCGCCTTCTGCCCGCAGGCCTGTTATGCAGGCGGCCCCGGCAAGTTCCGCTATCTGCTCTATAAGGATGTCAACCG
CCACATGAAGCTTGCATAA

Upstream 100 bases:

>100_bases
TGATACGGAGTTTGAAACCGCCTGCGCGCAGGTGGAACGCATCGCGCTCCTGCGCCTGAAAGACATCCTCCCCGAAACAC
TCTATTGATCGGATCCAGTC

Downstream 100 bases:

>100_bases
GACATGAAAAACGGGGCTGAAACAGCCCCGTTTGCCTTGTTCCATTCCGATTGGAACATGTTCCAATCAAGTGTTGAAAC
GTTTACTTTCCTGCGGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSRNYYAPTGGLPPQTQLLTDRAMFTEAYAVIPKGTFSDIVTSFLPFWEKTRLWVIARPLSGFAETFSQYIMEVQPGGGS
DRAELDEGAEGVLFVVEGEVSVTVAGKTHRLDEGGYAYLPPKSGWRLRNEGATTARFHWIRKAYEYVDGLDVPEPLFLNE
KDIAPSPMPDTGGAWATTRFVDPNDLRHDMHVTVVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
LRAFCPQACYAGGPGKFRYLLYKDVNRHMKLA

Sequences:

>Translated_272_residues
MSRNYYAPTGGLPPQTQLLTDRAMFTEAYAVIPKGTFSDIVTSFLPFWEKTRLWVIARPLSGFAETFSQYIMEVQPGGGS
DRAELDEGAEGVLFVVEGEVSVTVAGKTHRLDEGGYAYLPPKSGWRLRNEGATTARFHWIRKAYEYVDGLDVPEPLFLNE
KDIAPSPMPDTGGAWATTRFVDPNDLRHDMHVTVVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
LRAFCPQACYAGGPGKFRYLLYKDVNRHMKLA
>Mature_271_residues
SRNYYAPTGGLPPQTQLLTDRAMFTEAYAVIPKGTFSDIVTSFLPFWEKTRLWVIARPLSGFAETFSQYIMEVQPGGGSD
RAELDEGAEGVLFVVEGEVSVTVAGKTHRLDEGGYAYLPPKSGWRLRNEGATTARFHWIRKAYEYVDGLDVPEPLFLNEK
DIAPSPMPDTGGAWATTRFVDPNDLRHDMHVTVVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWL
RAFCPQACYAGGPGKFRYLLYKDVNRHMKLA

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=248, Percent_Identity=29.4354838709677, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 30538; Mature: 30407

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNYYAPTGGLPPQTQLLTDRAMFTEAYAVIPKGTFSDIVTSFLPFWEKTRLWVIARPL
CCCCEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEEEEECCH
SGFAETFSQYIMEVQPGGGSDRAELDEGAEGVLFVVEGEVSVTVAGKTHRLDEGGYAYLP
HHHHHHHHHHHEEECCCCCCCCHHHCCCCCEEEEEEECCEEEEECCCEEEECCCCEEECC
PKSGWRLRNEGATTARFHWIRKAYEYVDGLDVPEPLFLNEKDIAPSPMPDTGGAWATTRF
CCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEE
VDPNDLRHDMHVTVVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGKFRYLLYKDVNRHMKLA
EHHHCCHHHCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SRNYYAPTGGLPPQTQLLTDRAMFTEAYAVIPKGTFSDIVTSFLPFWEKTRLWVIARPL
CCCEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCEEEEEECCH
SGFAETFSQYIMEVQPGGGSDRAELDEGAEGVLFVVEGEVSVTVAGKTHRLDEGGYAYLP
HHHHHHHHHHHEEECCCCCCCCHHHCCCCCEEEEEEECCEEEEECCCEEEECCCCEEECC
PKSGWRLRNEGATTARFHWIRKAYEYVDGLDVPEPLFLNEKDIAPSPMPDTGGAWATTRF
CCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEE
VDPNDLRHDMHVTVVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGKFRYLLYKDVNRHMKLA
EHHHCCHHHCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]