| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is 23501154
Identifier: 23501154
GI number: 23501154
Start: 259175
End: 259348
Strand: Reverse
Name: 23501154
Synonym: BR0247
Alternate gene names: NA
Gene position: 259348-259175 (Counterclockwise)
Preceding gene: 23501155
Following gene: 23501153
Centisome position: 12.3
GC content: 62.07
Gene sequence:
>174_bases GTGACGCCATTGCGCCCGACGCGGCCCTGCCCTGAATGTGGCAAGCCCTCGACGCGCGAGGCCTACCCGTTCTGCTCACC GCGCTGCAAGAACATCGATCTCAATCGCTGGCTTTCCGGCAGCTACGTCATTGCGGGCAAACCGCTCGGCGAAGAAGACG AGAACGATAGCTAA
Upstream 100 bases:
>100_bases CGATGGCGGTTATCCCGTCTATGCCAATTGGGGCACAGGAAAGGTTTGATGGCTGGCAATGGATGAAAAGAAGAATATCT CCCCTGCTTGCGGCGCCAAG
Downstream 100 bases:
>100_bases GCTGTAGTTACAGCGGCGTTGGGAACCGTCTTTTGTGAATGAATCCGGTTGTTTAGCGAAGCCGTGAGAAAAGCTTATAA AAATTTCGATACGGTGCTGG
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MTPLRPTRPCPECGKPSTREAYPFCSPRCKNIDLNRWLSGSYVIAGKPLGEEDENDS
Sequences:
>Translated_57_residues MTPLRPTRPCPECGKPSTREAYPFCSPRCKNIDLNRWLSGSYVIAGKPLGEEDENDS >Mature_56_residues TPLRPTRPCPECGKPSTREAYPFCSPRCKNIDLNRWLSGSYVIAGKPLGEEDENDS
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1673_BRUME (P67479)
Other databases:
- EMBL: AE008917 - PIR: AC3461 - RefSeq: NP_540590.1 - ProteinModelPortal: P67479 - SMR: P67479 - GeneID: 1197384 - GenomeReviews: AE008917_GR - KEGG: bme:BMEI1673 - HOGENOM: HBG552546 - OMA: YVIPATE - ProtClustDB: PRK01343 - BioCyc: BMEL224914:BMEI1673-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 6384; Mature: 6253
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLRPTRPCPECGKPSTREAYPFCSPRCKNIDLNRWLSGSYVIAGKPLGEEDENDS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure TPLRPTRPCPECGKPSTREAYPFCSPRCKNIDLNRWLSGSYVIAGKPLGEEDENDS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688