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The map label for this gene is osmF [H]

Identifier: 23501132

GI number: 23501132

Start: 236424

End: 237338

Strand: Reverse

Name: osmF [H]

Synonym: BR0225

Alternate gene names: 23501132

Gene position: 237338-236424 (Counterclockwise)

Preceding gene: 23501133

Following gene: 23501131

Centisome position: 11.26

GC content: 56.83

Gene sequence:

>915_bases
TTGTTGAAGGGAAGTGCCTTTGCACTTGCCCTTTTTGTGGGCGCGATCCAGTTTTCCAGCCTCGCCGAGGCACAGGTCGC
CGTTTCATCCAAGATCGACACCGAAGGCGGCGTGCTCGGCAATATCATCCTGACCGTTCTCAATGCCAACGGCATCAAAA
CGACCGACCGCATCCAGCTTGGCGCGACACCGGTGGTGCGCAAAGCGATCACGGCAGGCGAGATCGACATCTATCCCGAA
TATACCGGTAATGCGGCCTTCTTCTTCAACAAGGCCGACGATCCACTCTGGAAAGACCCGGCCAAGGCTTACGAAACAGC
CAAAAAGCTTGATTACGACGCCAACAAGATCGTGTGGCTGACGCCCTCTCCCGCCAACAACACATGGGGCATCGCGGTGC
GCAAGGATGTGGCCAATGAAAACAAGCTCGCAAGCCTCAGCGATTTCGGCAAATATATTGCAGGCGGCGGCAAGGTGGTT
CTGGCGGCATCCTCCGAATTCGTGAATTCGGCGGCAGCACTGCCCGCTTTCCAGACCGCCTATGGCTTTACCCTGAAACC
CGATCAGCTCATCACGCTTTCAGGCGGCGATACGGCGGCAACAATTGCAGCCGCAGCCAACCAGACCAATGGCGCCAATG
CGGCCATGGTCTATGGCACCGATGGCGGCATCGCACCATCCGGGCTTGTCGTGCTGGAAGACGACAAGCATGTGCAGCCG
GTCTATCAGCCCGCACCGATCATCCGCGAGGAGGTTCTGAAAAAGGACCCGAAGATCGAGGAACTTCTGAAACCCGTTTT
CGAGAAACTCGACCTCACCACCTTGCAGGATCTGAACGGCCGCGTACAGCTTGGCGGCGAACCGGCAAAGGCGGTAGCGG
AAGATTTTCTGAAGAAAAACGGCTTTTTGAAATAG

Upstream 100 bases:

>100_bases
GGAAGGGGGCAAAAGGCGGTTTCCTTTTTCTGCCCGCGCTATAGTTTATCTCCACAGGGAAAAAACAGCGTGTGGGATGA
AGAGCATGTCGTATAGAAAC

Downstream 100 bases:

>100_bases
ACCTGATAAGGCAGCAAGCCCTTGCCGGAGACCATAGCAACACAGGAACGGCGCCCGGTCTTGCCAAACGGTGTGGGACA
CATCGCAGGCCGGATCGACA

Product: ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLKGSAFALALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPE
YTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVV
LAASSEFVNSAAALPAFQTAYGFTLKPDQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQP
VYQPAPIIREEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK

Sequences:

>Translated_304_residues
MLKGSAFALALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPE
YTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVV
LAASSEFVNSAAALPAFQTAYGFTLKPDQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQP
VYQPAPIIREEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK
>Mature_304_residues
MLKGSAFALALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQLGATPVVRKAITAGEIDIYPE
YTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWLTPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVV
LAASSEFVNSAAALPAFQTAYGFTLKPDQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQP
VYQPAPIIREEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKNGFLK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=294, Percent_Identity=56.1224489795918, Blast_Score=342, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32144; Mature: 32144

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGSAFALALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCEEEE
GATPVVRKAITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWL
CCCHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEE
TPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTA
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCHHHH
YGFTLKPDQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQP
CCCEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC
VYQPAPIIREEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKN
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHHC
GFLK
CCCC
>Mature Secondary Structure
MLKGSAFALALFVGAIQFSSLAEAQVAVSSKIDTEGGVLGNIILTVLNANGIKTTDRIQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCCCCCCCEEEE
GATPVVRKAITAGEIDIYPEYTGNAAFFFNKADDPLWKDPAKAYETAKKLDYDANKIVWL
CCCHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEE
TPSPANNTWGIAVRKDVANENKLASLSDFGKYIAGGGKVVLAASSEFVNSAAALPAFQTA
CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCHHHH
YGFTLKPDQLITLSGGDTAATIAAAANQTNGANAAMVYGTDGGIAPSGLVVLEDDKHVQP
CCCEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCC
VYQPAPIIREEVLKKDPKIEELLKPVFEKLDLTTLQDLNGRVQLGGEPAKAVAEDFLKKN
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCEEEECCCHHHHHHHHHHHHC
GFLK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]