Click here to switch to the map view.

The map label for this gene is 23501119

Identifier: 23501119

GI number: 23501119

Start: 222719

End: 223417

Strand: Reverse

Name: 23501119

Synonym: BR0212

Alternate gene names: NA

Gene position: 223417-222719 (Counterclockwise)

Preceding gene: 23501120

Following gene: 23501118

Centisome position: 10.6

GC content: 58.66

Gene sequence:

>699_bases
ATGAACCTGCCACAGCCGCATTACTCATCCGAACTTTTCACGCGCCTTCGCACTGCCACGCTTGCCGACTGGAAGCCCTA
TATCGAGCACGACTTCGTGCGGGGGCTTGGCGACGGCACGCTACCGAAAGCTGCCTTCCTGCATTATCTCCGGCAGGATT
ATGTCTATCTGCATCATTATGCCCGCGCCTTTGCGCTGGGCGTGGTCAAGGCCAATACATTGCAGGAAACGCGGCTTTGC
GTCGACATCATGCACAGTCTCACCCATATGGAACTGCCTTTGCATGTGCGCATCTGCGCCCGTGAAGGCATCAGCGAAGA
CGCGCTTTACGCCACGCGGGAGGAACCGGAAAACCTTGCCTATACGCGCTATGTGCTCGATTGCGGACAGGCAGGCGATT
TTCTCGATCTGCTGACAGCACTTGTGCCTTGCGCGCACGGCTATGGCGAGATCGGCCTCAACCTTGCCGCCACGGCCAGG
GCGGGCACGCCCTATCAGGAATGGATCGATACCTATGCCGGGTCTGAATATCAGGACATGTGCCGCACGGTCGGCAGGCT
TTTCGATCAGGCCGCAAGGGACCGCATCGGCGACGATTTCGAGAAAAGCCCGCGCTGGCCAAAACTCTGCCAGATTTTTG
CCACGGCAAGCAGGCTCGAAGCCGATTTCTGGTCCATGGGCTTGAAGGCCGGATCGTGA

Upstream 100 bases:

>100_bases
GGAGCCGCTGTGAATCCTATCTGAAGGAGCATGGCCTCGTGCCCTCCATCCTGCCGGTCGAAAAATTGGCCATCGACGTC
AATGCGGAAGGGAGCAAGAC

Downstream 100 bases:

>100_bases
ACGACGCAGTCCCGAACCGAAGCCGATTAAAGCGCGCCGCCGATGGGTTCCTGTCGGTGGCGGCGGCACTCGCCATCTGG
CAGGCGGTGGTCAGCATCGG

Product: transcriptional regulator TenA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYLRQDYVYLHHYARAFALGVVKANTLQETRLC
VDIMHSLTHMELPLHVRICAREGISEDALYATREEPENLAYTRYVLDCGQAGDFLDLLTALVPCAHGYGEIGLNLAATAR
AGTPYQEWIDTYAGSEYQDMCRTVGRLFDQAARDRIGDDFEKSPRWPKLCQIFATASRLEADFWSMGLKAGS

Sequences:

>Translated_232_residues
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYLRQDYVYLHHYARAFALGVVKANTLQETRLC
VDIMHSLTHMELPLHVRICAREGISEDALYATREEPENLAYTRYVLDCGQAGDFLDLLTALVPCAHGYGEIGLNLAATAR
AGTPYQEWIDTYAGSEYQDMCRTVGRLFDQAARDRIGDDFEKSPRWPKLCQIFATASRLEADFWSMGLKAGS
>Mature_232_residues
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYLRQDYVYLHHYARAFALGVVKANTLQETRLC
VDIMHSLTHMELPLHVRICAREGISEDALYATREEPENLAYTRYVLDCGQAGDFLDLLTALVPCAHGYGEIGLNLAATAR
AGTPYQEWIDTYAGSEYQDMCRTVGRLFDQAARDRIGDDFEKSPRWPKLCQIFATASRLEADFWSMGLKAGS

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=210, Percent_Identity=30, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324997, Length=211, Percent_Identity=29.3838862559242, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6325378, Length=210, Percent_Identity=29.5238095238095, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 26271; Mature: 26271

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYLRQDYVYLHHY
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ARAFALGVVKANTLQETRLCVDIMHSLTHMELPLHVRICAREGISEDALYATREEPENLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCHHHHHHCCCCCCHHH
YTRYVLDCGQAGDFLDLLTALVPCAHGYGEIGLNLAATARAGTPYQEWIDTYAGSEYQDM
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCEECCCCCCCHHHHHHHHCCCCHHHH
CRTVGRLFDQAARDRIGDDFEKSPRWPKLCQIFATASRLEADFWSMGLKAGS
HHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNLPQPHYSSELFTRLRTATLADWKPYIEHDFVRGLGDGTLPKAAFLHYLRQDYVYLHHY
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ARAFALGVVKANTLQETRLCVDIMHSLTHMELPLHVRICAREGISEDALYATREEPENLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCHHHHHHCCCCCCHHH
YTRYVLDCGQAGDFLDLLTALVPCAHGYGEIGLNLAATARAGTPYQEWIDTYAGSEYQDM
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHCCCCEECCCCCCCHHHHHHHHCCCCHHHH
CRTVGRLFDQAARDRIGDDFEKSPRWPKLCQIFATASRLEADFWSMGLKAGS
HHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]