| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
Click here to switch to the map view.
The map label for this gene is imuB [H]
Identifier: 23500985
GI number: 23500985
Start: 76108
End: 77559
Strand: Reverse
Name: imuB [H]
Synonym: BR0070
Alternate gene names: 23500985
Gene position: 77559-76108 (Counterclockwise)
Preceding gene: 23500986
Following gene: 23500984
Centisome position: 3.68
GC content: 64.81
Gene sequence:
>1452_bases GTGACAGAACGCACGGCCAATGCGCTGCGCCTGACGGCGGTGGATGGTGAAGCGGCAAAGCTCGGCCTTTTTCCCGGCAT GGCGCTGACCGATGCCCGCGCCCGCGTGGAAAGGCTCGACGTGGCAGCGGCAGCGCCGGAACATGATACCGCACTTCTCA AGCGCCTTGCCCAGTGGTGCGAGCGCTACACGCCGCTTGTCGCCTTCGATGAGCCGCATGGGTTGATGCTGGACATAACC GGCTGCGCGCATTTGTTCGGCGGGCCTGCCGCCATGCGTGCTGACGCCCTTTGCCGCTTTGAACGCGCCGGGCTGCACGT GCAGGCGGCGATTGCCGATAACAGTTTTGCCGCCCGGCTTCTGGCGCGGGGAACGAAGGGCGGTGTTTTCAGCCAAGCGG AGGCCGACCGGCTGCTTCCCCGCCTGCCCCTTTCCGCGCTTGAACTGGCGCAAGCCGCAGAAACCGGCCTCAAGCGCGCC GGGCTGAAACGGATCGGTGATGTGATGGCGCTGCCCCGCTCTGCCCTCACCGCCCGTTTCGGCACCGATCTTGCCACCAG GCTCGACCGGCTGGCGCGGCGCGAGCGCGCGCCGATTTCCCCCTTGCGCATCCTGCCGCTCAGAACCGTCGAACGCCGCC TGTCAGAGCCGGTGACGGCAATGGAACTGGTGGAACATATATTGCGGGAACTGGCGCAGGCGCTGTTTGCGCAGCTTGAA ATGGAAGGCAAGGGCGCGCTTCTGCTTGAGGCGTCGTTCTTCCGGGTCGATGGCGAGGTGCGCCATATCCGTATCGAAAC AGGCCAGCCCTTGCGCGACGACAGGATTTTTCTGCGCCTTGCGCGCGAAAGGCTGGGTGCGCTCACCGATCCGCTTGATG CCGGTTTCGGCTTCGACATGATCCGGCTGGCAGCACTGCGCAGCAGCACAGTGGCCCAGCGCCAGACGGGGCTCGACCAG CATGAGGAAGACGAAGCCGGCTTCAGCCAGCTTATCGACCGGCTTTCGGCACGGCTTGGACAGGACCGCGTTCTCGTCTC CTTTCCGCGCGACACCCATATGCCGGAGCGCGCTTACGGCCTCGCCCCTGCCTTGCATGGATCGCGGAAAACCGAAGCCG ATTATCGCAGCCAGGCGGAACTGCCGGGCGACTCGCCCGCACGCCCCATAAAACTGTTCCGTCCGCCACAATTGATCGAA ACCGTCGCCGAAGTGCCCGACAGTCCGCCCTCCTTCTTCCTGTGGCGGCGGGTGCGCCATCAGGTGCGCCTTGCCGAAGG GCCGGAACGGATCGAGCCGGAATGGTGGTGCGCAATCGGTCAGGACGTGCCGGAACTGCGCGATTATTACCGGGTGGAGG ATGAAAACGGCCAGCGTTTCTGGATTTTTCGCGAAGGGCTTTATGACGGCGCCAATCACCCGCGCTGGTTTCTGCATGGG CTGTTCGCGTGA
Upstream 100 bases:
>100_bases GGCAGAACGCTTGTTTCTCGCCCTCTGGTTTCCGTTTCTGCCGACCGACCGGCTTCGCCGCGCCGTTCCGCCTGATGGCA AGGAGCGGCTTCCTCTGGTC
Downstream 100 bases:
>100_bases TGGTTCCTTATTTTGAAATGGCCGCTGCCAGCAATTTTTCCTTCCTTTGCGGTGCATCGCATCCGCAGGAACTGGTAGAG CGTGCGCATGCGCTTGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDTALLKRLAQWCERYTPLVAFDEPHGLMLDIT GCAHLFGGPAAMRADALCRFERAGLHVQAAIADNSFAARLLARGTKGGVFSQAEADRLLPRLPLSALELAQAAETGLKRA GLKRIGDVMALPRSALTARFGTDLATRLDRLARRERAPISPLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLE MEGKGALLLEASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDMIRLAALRSSTVAQRQTGLDQ HEEDEAGFSQLIDRLSARLGQDRVLVSFPRDTHMPERAYGLAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIE TVAEVPDSPPSFFLWRRVRHQVRLAEGPERIEPEWWCAIGQDVPELRDYYRVEDENGQRFWIFREGLYDGANHPRWFLHG LFA
Sequences:
>Translated_483_residues MTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDTALLKRLAQWCERYTPLVAFDEPHGLMLDIT GCAHLFGGPAAMRADALCRFERAGLHVQAAIADNSFAARLLARGTKGGVFSQAEADRLLPRLPLSALELAQAAETGLKRA GLKRIGDVMALPRSALTARFGTDLATRLDRLARRERAPISPLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLE MEGKGALLLEASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDMIRLAALRSSTVAQRQTGLDQ HEEDEAGFSQLIDRLSARLGQDRVLVSFPRDTHMPERAYGLAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIE TVAEVPDSPPSFFLWRRVRHQVRLAEGPERIEPEWWCAIGQDVPELRDYYRVEDENGQRFWIFREGLYDGANHPRWFLHG LFA >Mature_482_residues TERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDTALLKRLAQWCERYTPLVAFDEPHGLMLDITG CAHLFGGPAAMRADALCRFERAGLHVQAAIADNSFAARLLARGTKGGVFSQAEADRLLPRLPLSALELAQAAETGLKRAG LKRIGDVMALPRSALTARFGTDLATRLDRLARRERAPISPLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLEM EGKGALLLEASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDMIRLAALRSSTVAQRQTGLDQH EEDEAGFSQLIDRLSARLGQDRVLVSFPRDTHMPERAYGLAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIET VAEVPDSPPSFFLWRRVRHQVRLAEGPERIEPEWWCAIGQDVPELRDYYRVEDENGQRFWIFREGLYDGANHPRWFLHGL FA
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 54011; Mature: 53879
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDTALLKRLAQWC CCCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ERYTPLVAFDEPHGLMLDITGCAHLFGGPAAMRADALCRFERAGLHVQAAIADNSFAARL HHCCCEEEECCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH LARGTKGGVFSQAEADRLLPRLPLSALELAQAAETGLKRAGLKRIGDVMALPRSALTARF HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GTDLATRLDRLARRERAPISPLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLE CCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MEGKGALLLEASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDM CCCCCEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH IRLAALRSSTVAQRQTGLDQHEEDEAGFSQLIDRLSARLGQDRVLVSFPRDTHMPERAYG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHC LAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIETVAEVPDSPPSFFLWRRVRH CCHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHH QVRLAEGPERIEPEWWCAIGQDVPELRDYYRVEDENGQRFWIFREGLYDGANHPRWFLHG HHHHCCCCCCCCCHHEEECCCCCHHHHHHEECCCCCCCEEEEEECCCCCCCCCCHHHHHH LFA HCC >Mature Secondary Structure TERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDTALLKRLAQWC CCCCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ERYTPLVAFDEPHGLMLDITGCAHLFGGPAAMRADALCRFERAGLHVQAAIADNSFAARL HHCCCEEEECCCCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH LARGTKGGVFSQAEADRLLPRLPLSALELAQAAETGLKRAGLKRIGDVMALPRSALTARF HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH GTDLATRLDRLARRERAPISPLRILPLRTVERRLSEPVTAMELVEHILRELAQALFAQLE CCHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH MEGKGALLLEASFFRVDGEVRHIRIETGQPLRDDRIFLRLARERLGALTDPLDAGFGFDM CCCCCEEEEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH IRLAALRSSTVAQRQTGLDQHEEDEAGFSQLIDRLSARLGQDRVLVSFPRDTHMPERAYG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHC LAPALHGSRKTEADYRSQAELPGDSPARPIKLFRPPQLIETVAEVPDSPPSFFLWRRVRH CCHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHH QVRLAEGPERIEPEWWCAIGQDVPELRDYYRVEDENGQRFWIFREGLYDGANHPRWFLHG HHHHCCCCCCCCCHHEEECCCCCHHHHHHEECCCCCCCEEEEEECCCCCCCCCCHHHHHH LFA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA