| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is ycjS [C]
Identifier: 23100857
GI number: 23100857
Start: 3537675
End: 3538868
Strand: Direct
Name: ycjS [C]
Synonym: OB3402
Alternate gene names: 23100857
Gene position: 3537675-3538868 (Clockwise)
Preceding gene: 23100856
Following gene: 23100858
Centisome position: 97.44
GC content: 42.04
Gene sequence:
>1194_bases TTGAGAAAAACATGTGATATCGTCTTAGTCGGTATCGCCGGTTATGGCGAAATTTACTTACGTGCATTAGAAGAAAGAGG CTACCTGACTTGGATTCAAGGTGTCGTAGATATACATCCTGAACGCAGTACCTATTACTCCAAACTAGAAGCATTAAAAA TTCCTTGTTATGCATCGCTTGATGAATTTTACCAGCATGCTTCTGCGGACTTAGCAATTATTTCTAGTCCCATCCATTTA CATGCTCGTCAATCGATTACCGCAATGGAAAATGGCAGTCATGTTCTTTGTGAGAAACCAATTGCTGGGTCATTGGCAGA AGCAAATCAAATGCGCGAAACCAGAGATAAAACCGGACATTTTTTAGCTGTCGGGTTTAATTGGTCGTTCAGCACGGCTG TACAGCAATTAAAAAAGGACTTCCAAGAAGGACAATTTGGAAAGCCATTGCGTGGTAAAAGTCTTGTGCTTTGGCCTCGA AACAAACAATATTTCCAGCGCTCCAATTGGGCAGGCAAACGTCTCGGTCCAAATGGGGAAGCTATATACGATAGCATCGC TAATAACGCAGCATCGCACTTCCTTCACCACCTCCTTTATGTATTAGGAAATACAACGGAACAAAGCGCAAAAATAAAGC AATTAGAAGTAGAGCTATACAAAGCAAATCCCATCGAAACCTTTGATACATGTGCGCTGCGAGCGACCACAAAACAGTCT GTAGAGTTAGTATATCTCGTTTCTCATGCCGTCGATTCTACGATGGGCCCAGACGTTACTTTAGAATGCGAACACGCCAC GATTACCTATGAAGCAGATGGCAATATGCACGCCGTGTTTAAAGATGGAACAACGAAAAGCTACGGCGATCCAGAGGCTG CACATTCTCAAAAGTTAGATGTGTGTATTCAAGCAGTGTTACACGAAGAAACCTCCATCCCATGTAGTATAGAAGCTGCA TATTCACATTTGCTTAGTATTGAATACATACATCGCTCGATTCCAACGGTGCCACATTTCCCTTCAAAAATGATAAAGCA TGATGCTCAAACACAACGAACATATGTGCATCAATTAGAAGAAAACTTTTTATCTTGTTACGGAGCATATAAGCTGCCGA GTGAAATGAACATCCCTTGGGCGCACCAACCCATAACAATCCAAATTCCCGAAAATAGCTACCCATACGAATAG
Upstream 100 bases:
>100_bases CGTCGACCGCAATGCCGCAGGAACATGCATTTAAAGCAGCAGAGCTATGCCTGTTAGCACAACAGCATGCAGATACTCAG AAGAAAGAAGGTGGCATTCG
Downstream 100 bases:
>100_bases AAACAACAAGATTGAAAATGTCCGGACTACAGATAACAAGCTGTTCGGACATTTTTTCCAACCTAGTCTCGCTTATTTCT GTTTTTCTTTCTGAAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Oxidoreductase Domain Protein; Dehydrogenase; Lipopolysaccharide Biosynthesis Protein; Secreted Oxidoreductase; Oxidoreductase Family Protein; Dehydrogenase-Like Protein; WblB Protein; Dehydrogenase And Related Proteins; Oxidoreductase-Like; Lipopolysaccharide Biosynthesis Protein BplA; Myo-Inositol 2-Dehydrogenase; Dehydrogenases And Related Proteins
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRKTCDIVLVGIAGYGEIYLRALEERGYLTWIQGVVDIHPERSTYYSKLEALKIPCYASLDEFYQHASADLAIISSPIHL HARQSITAMENGSHVLCEKPIAGSLAEANQMRETRDKTGHFLAVGFNWSFSTAVQQLKKDFQEGQFGKPLRGKSLVLWPR NKQYFQRSNWAGKRLGPNGEAIYDSIANNAASHFLHHLLYVLGNTTEQSAKIKQLEVELYKANPIETFDTCALRATTKQS VELVYLVSHAVDSTMGPDVTLECEHATITYEADGNMHAVFKDGTTKSYGDPEAAHSQKLDVCIQAVLHEETSIPCSIEAA YSHLLSIEYIHRSIPTVPHFPSKMIKHDAQTQRTYVHQLEENFLSCYGAYKLPSEMNIPWAHQPITIQIPENSYPYE
Sequences:
>Translated_397_residues MRKTCDIVLVGIAGYGEIYLRALEERGYLTWIQGVVDIHPERSTYYSKLEALKIPCYASLDEFYQHASADLAIISSPIHL HARQSITAMENGSHVLCEKPIAGSLAEANQMRETRDKTGHFLAVGFNWSFSTAVQQLKKDFQEGQFGKPLRGKSLVLWPR NKQYFQRSNWAGKRLGPNGEAIYDSIANNAASHFLHHLLYVLGNTTEQSAKIKQLEVELYKANPIETFDTCALRATTKQS VELVYLVSHAVDSTMGPDVTLECEHATITYEADGNMHAVFKDGTTKSYGDPEAAHSQKLDVCIQAVLHEETSIPCSIEAA YSHLLSIEYIHRSIPTVPHFPSKMIKHDAQTQRTYVHQLEENFLSCYGAYKLPSEMNIPWAHQPITIQIPENSYPYE >Mature_397_residues MRKTCDIVLVGIAGYGEIYLRALEERGYLTWIQGVVDIHPERSTYYSKLEALKIPCYASLDEFYQHASADLAIISSPIHL HARQSITAMENGSHVLCEKPIAGSLAEANQMRETRDKTGHFLAVGFNWSFSTAVQQLKKDFQEGQFGKPLRGKSLVLWPR NKQYFQRSNWAGKRLGPNGEAIYDSIANNAASHFLHHLLYVLGNTTEQSAKIKQLEVELYKANPIETFDTCALRATTKQS VELVYLVSHAVDSTMGPDVTLECEHATITYEADGNMHAVFKDGTTKSYGDPEAAHSQKLDVCIQAVLHEETSIPCSIEAA YSHLLSIEYIHRSIPTVPHFPSKMIKHDAQTQRTYVHQLEENFLSCYGAYKLPSEMNIPWAHQPITIQIPENSYPYE
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 44722; Mature: 44722
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTCDIVLVGIAGYGEIYLRALEERGYLTWIQGVVDIHPERSTYYSKLEALKIPCYASL CCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHEECCCCCCH DEFYQHASADLAIISSPIHLHARQSITAMENGSHVLCEKPIAGSLAEANQMRETRDKTGH HHHHHHCCCCEEEEECCEEEECCCCEEHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC FLAVGFNWSFSTAVQQLKKDFQEGQFGKPLRGKSLVLWPRNKQYFQRSNWAGKRLGPNGE EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCH AIYDSIANNAASHFLHHLLYVLGNTTEQSAKIKQLEVELYKANPIETFDTCALRATTKQS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCHHHHEEEECCCCC VELVYLVSHAVDSTMGPDVTLECEHATITYEADGNMHAVFKDGTTKSYGDPEAAHSQKLD EEEEEEEHHHHHCCCCCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHH VCIQAVLHEETSIPCSIEAAYSHLLSIEYIHRSIPTVPHFPSKMIKHDAQTQRTYVHQLE HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ENFLSCYGAYKLPSEMNIPWAHQPITIQIPENSYPYE HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MRKTCDIVLVGIAGYGEIYLRALEERGYLTWIQGVVDIHPERSTYYSKLEALKIPCYASL CCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHEECCCCCCH DEFYQHASADLAIISSPIHLHARQSITAMENGSHVLCEKPIAGSLAEANQMRETRDKTGH HHHHHHCCCCEEEEECCEEEECCCCEEHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCC FLAVGFNWSFSTAVQQLKKDFQEGQFGKPLRGKSLVLWPRNKQYFQRSNWAGKRLGPNGE EEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCH AIYDSIANNAASHFLHHLLYVLGNTTEQSAKIKQLEVELYKANPIETFDTCALRATTKQS HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCHHHHEEEECCCCC VELVYLVSHAVDSTMGPDVTLECEHATITYEADGNMHAVFKDGTTKSYGDPEAAHSQKLD EEEEEEEHHHHHCCCCCCEEEEECCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHH VCIQAVLHEETSIPCSIEAAYSHLLSIEYIHRSIPTVPHFPSKMIKHDAQTQRTYVHQLE HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH ENFLSCYGAYKLPSEMNIPWAHQPITIQIPENSYPYE HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA