Definition Oceanobacillus iheyensis HTE831, complete genome.
Accession NC_004193
Length 3,630,528

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The map label for this gene is yhxD [H]

Identifier: 23100735

GI number: 23100735

Start: 3417193

End: 3418080

Strand: Direct

Name: yhxD [H]

Synonym: OB3280

Alternate gene names: 23100735

Gene position: 3417193-3418080 (Clockwise)

Preceding gene: 23100734

Following gene: 23100736

Centisome position: 94.12

GC content: 44.59

Gene sequence:

>888_bases
ATGCCACAAAATCCAAGAACAAAATATACAAATGAAGATTTCCCAAAGCAATTTCAAGAACAGCCAGGTATTCAAAGAGA
AATGACGCCGATTCCTGACTGCGGCGAAACAACGTACAAGGGATCGGGACAGTTACAAGGCAGGAAAGCACTCATTACAG
GTGGTGACTCTGGTATTGGAAGAGCTGCTGCTATCGCGTATGCTCGTGAGGGTGCAGATGTTGCGATTAATTACCTTCCT
GTGGAAGAATCAGATGCATTGGAAGTAAAAGCACTTATTGAAGAAGCCGGACAAAAAGCCGTTTTACTTCCCGGAGATTT
ACGTGATGAACAATTCACTCGTTCATTAATACACGAAGCTATCAATGAACTAGACGGATTAGATACGTTAGTCATGGTTG
CTGGTGAACAACAAGCTGTAGAAGACATTACGAATCTTTCAACAGAACAATTAGTATCGACCTTCCAGACCAATGTATAT
TCCATGTATTGGATGGTTCAAGAGGCCATCCCACACATGCCGCCGGGAAGCTCTATTATTACGACTTCCTCCGTGGAAGG
TTATGACCCTTCACCAATGCTAATGGACTACGCGCCAACAAAAAGCGCGATTATTGGTTTCACCAAAGGGTTAGCCAAAC
AATTAAGTTCCAAAGGAATCCGTGTTAATTCTGTCGCACCTGGTCCTTACTGGTCTGCTCTGCAAATATCCGGCGGTCAG
CCACAAGAAAACATTCCGAAGTTCGGTAAAGAAACACCTGAAACACCTTTAGGCCGAGCCGGACAACCAGCAGAATTAGG
CGGTCTATATGTATTTATCGCTTCAGAACACGCAAGTTATGCGACCGGTCATGTATTTAGCGCTACAGGCGGTTTGCGTG
CGAACTAA

Upstream 100 bases:

>100_bases
TTATGTATTGGGGAGACCTTTTTTAGACTACGATGTTTTATTTACCGACTAACTAGGGAAAATAAATTGTACGTACAAAA
ATAAGAAAGGATGCAATACG

Downstream 100 bases:

>100_bases
GCTTGATAAAACAATCTTATTCTCAATATAAAGAAGTACATCACTTTCTACAGTGATGTACTTTTTTATTTAGTGTGTAA
ATCTATTTAGGTATAAAGTT

Product: oxidoreductase

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPQNPRTKYTNEDFPKQFQEQPGIQREMTPIPDCGETTYKGSGQLQGRKALITGGDSGIGRAAAIAYAREGADVAINYLP
VEESDALEVKALIEEAGQKAVLLPGDLRDEQFTRSLIHEAINELDGLDTLVMVAGEQQAVEDITNLSTEQLVSTFQTNVY
SMYWMVQEAIPHMPPGSSIITTSSVEGYDPSPMLMDYAPTKSAIIGFTKGLAKQLSSKGIRVNSVAPGPYWSALQISGGQ
PQENIPKFGKETPETPLGRAGQPAELGGLYVFIASEHASYATGHVFSATGGLRAN

Sequences:

>Translated_295_residues
MPQNPRTKYTNEDFPKQFQEQPGIQREMTPIPDCGETTYKGSGQLQGRKALITGGDSGIGRAAAIAYAREGADVAINYLP
VEESDALEVKALIEEAGQKAVLLPGDLRDEQFTRSLIHEAINELDGLDTLVMVAGEQQAVEDITNLSTEQLVSTFQTNVY
SMYWMVQEAIPHMPPGSSIITTSSVEGYDPSPMLMDYAPTKSAIIGFTKGLAKQLSSKGIRVNSVAPGPYWSALQISGGQ
PQENIPKFGKETPETPLGRAGQPAELGGLYVFIASEHASYATGHVFSATGGLRAN
>Mature_294_residues
PQNPRTKYTNEDFPKQFQEQPGIQREMTPIPDCGETTYKGSGQLQGRKALITGGDSGIGRAAAIAYAREGADVAINYLPV
EESDALEVKALIEEAGQKAVLLPGDLRDEQFTRSLIHEAINELDGLDTLVMVAGEQQAVEDITNLSTEQLVSTFQTNVYS
MYWMVQEAIPHMPPGSSIITTSSVEGYDPSPMLMDYAPTKSAIIGFTKGLAKQLSSKGIRVNSVAPGPYWSALQISGGQP
QENIPKFGKETPETPLGRAGQPAELGGLYVFIASEHASYATGHVFSATGGLRAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=255, Percent_Identity=29.8039215686275, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=29.6, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI15277342, Length=263, Percent_Identity=29.277566539924, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=29.0983606557377, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI59889578, Length=197, Percent_Identity=31.4720812182741, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI33667109, Length=187, Percent_Identity=31.0160427807487, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI66933014, Length=258, Percent_Identity=32.5581395348837, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=29.4392523364486, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI126723750, Length=269, Percent_Identity=26.3940520446097, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=27.1317829457364, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1789378, Length=289, Percent_Identity=62.2837370242215, Blast_Score=383, Evalue=1e-108,
Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=36.144578313253, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=30.1960784313725, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=28.4, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367365, Length=254, Percent_Identity=28.740157480315, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=30.078125, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=28.8, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=28.2868525896414, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=26, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=24.7058823529412, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=29.3877551020408, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=32.6996197718631, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=265, Percent_Identity=32.4528301886792, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=30.5343511450382, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=31.2977099236641, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=28.7937743190661, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=28.5140562248996, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=30.5343511450382, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=30.5019305019305, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=28.1368821292776, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=30, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=30.7984790874525, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=30.0380228136882, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=30.1158301158301, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=29.3436293436293, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=255, Percent_Identity=29.8039215686275, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=268, Percent_Identity=26.865671641791, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.5454545454545, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=29.0566037735849, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=26.2172284644195, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=262, Percent_Identity=29.7709923664122, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538182, Length=265, Percent_Identity=29.4339622641509, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538486, Length=259, Percent_Identity=29.3436293436293, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=30.859375, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=26.615969581749, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=26.3565891472868, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=217, Percent_Identity=26.7281105990783, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=33.201581027668, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=31.6205533596838, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=30.9236947791165, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=30.1204819277108, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=27.710843373494, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24639444, Length=257, Percent_Identity=26.8482490272374, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=31.6205533596838, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17737361, Length=261, Percent_Identity=28.3524904214559, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=26.2948207171315, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31695; Mature: 31564

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MPQNPRTKYTNEDFPKQFQEQPGIQREMTPIPDCGETTYKGSGQLQGRKALITGGDSGIG
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
RAAAIAYAREGADVAINYLPVEESDALEVKALIEEAGQKAVLLPGDLRDEQFTRSLIHEA
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
INELDGLDTLVMVAGEQQAVEDITNLSTEQLVSTFQTNVYSMYWMVQEAIPHMPPGSSII
HHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
TTSSVEGYDPSPMLMDYAPTKSAIIGFTKGLAKQLSSKGIRVNSVAPGPYWSALQISGGQ
EECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCC
PQENIPKFGKETPETPLGRAGQPAELGGLYVFIASEHASYATGHVFSATGGLRAN
CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
PQNPRTKYTNEDFPKQFQEQPGIQREMTPIPDCGETTYKGSGQLQGRKALITGGDSGIG
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
RAAAIAYAREGADVAINYLPVEESDALEVKALIEEAGQKAVLLPGDLRDEQFTRSLIHEA
HHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH
INELDGLDTLVMVAGEQQAVEDITNLSTEQLVSTFQTNVYSMYWMVQEAIPHMPPGSSII
HHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
TTSSVEGYDPSPMLMDYAPTKSAIIGFTKGLAKQLSSKGIRVNSVAPGPYWSALQISGGQ
EECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCC
PQENIPKFGKETPETPLGRAGQPAELGGLYVFIASEHASYATGHVFSATGGLRAN
CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 8196543 [H]