Definition Oceanobacillus iheyensis HTE831, complete genome.
Accession NC_004193
Length 3,630,528

Click here to switch to the map view.

The map label for this gene is ydbS [H]

Identifier: 23100654

GI number: 23100654

Start: 3329760

End: 3330263

Strand: Direct

Name: ydbS [H]

Synonym: OB3199

Alternate gene names: 23100654

Gene position: 3329760-3330263 (Clockwise)

Preceding gene: 23100653

Following gene: 23100655

Centisome position: 91.72

GC content: 35.91

Gene sequence:

>504_bases
ATGCACAATCAAATAGAAGAACCAACGGAGAGAATATCCGAGAAGGCAATACTTGTTTGGCGTACAGTAAACGGTATTAT
ACTATCGGTAGCATTTATTATAGTAATTGCACTATTAATCGCACATACATATTTTTCTTGGTATGACTGGATAGCCTATG
TACTATGGGGACTAGTTGCGCTTAGTATACTTGATATTATCTGGTCAATCTATTTAGAGCCTTATTTACAACAGAAATAT
TGGCGATATCAAGTAGATGAAGATTTTGTACAAATAAAACATGGTCGATGGAAACTTGTTCATATCGTCATTCCGATGAC
AAAAATTCAGTATGTCGGTTTGAAACAAGGACCGTTACTACGTAAATATAATTTACATACCTTATCTATTGGAACAATGG
CTTCTACACACGAAATTCCAGCTATTCCGGAAGATACAGCTCGAGCGATACGAGACCAAATCGCTGAATTAGCAAATATT
AATAAGGAGGAAGGAGAGGAATGA

Upstream 100 bases:

>100_bases
AAAATTTAATAAAATTATTTAGGATTCACTACATAGATAAGAGAAGTTGAAACTTAATCCTCCCATATATCGTATAAGTA
GTTAAGAGAGGAGATGGAAC

Downstream 100 bases:

>100_bases
TGCAATCAAAACGCATGCACCCATTAATGATTGCTTCATCCATTTTACGTTCGATTAAAGATCTGTTCTTTTTAATACTA
ATTTTATTTGTCATTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MHNQIEEPTERISEKAILVWRTVNGIILSVAFIIVIALLIAHTYFSWYDWIAYVLWGLVALSILDIIWSIYLEPYLQQKY
WRYQVDEDFVQIKHGRWKLVHIVIPMTKIQYVGLKQGPLLRKYNLHTLSIGTMASTHEIPAIPEDTARAIRDQIAELANI
NKEEGEE

Sequences:

>Translated_167_residues
MHNQIEEPTERISEKAILVWRTVNGIILSVAFIIVIALLIAHTYFSWYDWIAYVLWGLVALSILDIIWSIYLEPYLQQKY
WRYQVDEDFVQIKHGRWKLVHIVIPMTKIQYVGLKQGPLLRKYNLHTLSIGTMASTHEIPAIPEDTARAIRDQIAELANI
NKEEGEE
>Mature_167_residues
MHNQIEEPTERISEKAILVWRTVNGIILSVAFIIVIALLIAHTYFSWYDWIAYVLWGLVALSILDIIWSIYLEPYLQQKY
WRYQVDEDFVQIKHGRWKLVHIVIPMTKIQYVGLKQGPLLRKYNLHTLSIGTMASTHEIPAIPEDTARAIRDQIAELANI
NKEEGEE

Specific function: Unknown

COG id: COG3402

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 19515; Mature: 19515

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNQIEEPTERISEKAILVWRTVNGIILSVAFIIVIALLIAHTYFSWYDWIAYVLWGLVA
CCCCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSILDIIWSIYLEPYLQQKYWRYQVDEDFVQIKHGRWKLVHIVIPMTKIQYVGLKQGPLL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEECHHHHEECCCCCCCCE
RKYNLHTLSIGTMASTHEIPAIPEDTARAIRDQIAELANINKEEGEE
EECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHNQIEEPTERISEKAILVWRTVNGIILSVAFIIVIALLIAHTYFSWYDWIAYVLWGLVA
CCCCCCCHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSILDIIWSIYLEPYLQQKYWRYQVDEDFVQIKHGRWKLVHIVIPMTKIQYVGLKQGPLL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEECHHHHEECCCCCCCCE
RKYNLHTLSIGTMASTHEIPAIPEDTARAIRDQIAELANINKEEGEE
EECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]