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The map label for this gene is ycaK [H]

Identifier: 23100637

GI number: 23100637

Start: 3312790

End: 3313362

Strand: Direct

Name: ycaK [H]

Synonym: OB3182

Alternate gene names: 23100637

Gene position: 3312790-3313362 (Clockwise)

Preceding gene: 23100633

Following gene: 23100639

Centisome position: 91.25

GC content: 35.6

Gene sequence:

>573_bases
ATGAAGGTATTAACAATTGTTGCACATCCTAGAGAAGAATCTTTAACGATGAAAGTCACCAATCGATTTATAGAAGGTCT
ACAAGATGCTGGTCATACTGTTGAATTTATTGATTTATATCGTCATGAATTTGAAGCTGCATTGCCAGTTGCTGATGAGC
CTATATGGGATGCAGAGGAGCAGCATTTTTCACCAGAAGTTACGAAAGAGATAGAGCGAATGAAAAGTGCAGATGCATTA
GCATTTATTTTTCCATTATGGTGGTGGAGTATGCCAGGAATTATGAAAGGTTATATAGATCGTGTGTGGAATTTTGGATT
TGCATACGGAAATAGCAATTTACATCATGAGCATGTGCTCTGGCTTGGATTAGCTGCAGCTGATAAGAAAAAACTTGAAA
AGCGAAAGTATAATACGATGATGGAACATTATTTTAATGTTGGTCTAGCTGATTACTGTGGTATTCCAAGCTCTACATTT
CACTTACTCACCGAAACCAATAAAGTAAATTCTCAACAACTTGATAATTGGTTAATGCAAGCATATGAATTAGGACGTAA
CTATGAAAAATAA

Upstream 100 bases:

>100_bases
AAAATTACTGAACGTTAATATCTAATAATTCAATTTTACTGTATACACTCATTACTTTAAACTAGATATAACACATTTTC
AATGAGGAGCTGATACTATC

Downstream 100 bases:

>100_bases
AAATAACTGTCGAAGAGAATAAGTAACTCTTCGACAGTTATGCTTTGCTCTTTATCTTGAAGTATATCCAGCATCAGCGT
GAATTGTTGTACCTGTTACA

Product: hypothetical protein

Products: NAD+; NADP+; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKVLTIVAHPREESLTMKVTNRFIEGLQDAGHTVEFIDLYRHEFEAALPVADEPIWDAEEQHFSPEVTKEIERMKSADAL
AFIFPLWWWSMPGIMKGYIDRVWNFGFAYGNSNLHHEHVLWLGLAAADKKKLEKRKYNTMMEHYFNVGLADYCGIPSSTF
HLLTETNKVNSQQLDNWLMQAYELGRNYEK

Sequences:

>Translated_190_residues
MKVLTIVAHPREESLTMKVTNRFIEGLQDAGHTVEFIDLYRHEFEAALPVADEPIWDAEEQHFSPEVTKEIERMKSADAL
AFIFPLWWWSMPGIMKGYIDRVWNFGFAYGNSNLHHEHVLWLGLAAADKKKLEKRKYNTMMEHYFNVGLADYCGIPSSTF
HLLTETNKVNSQQLDNWLMQAYELGRNYEK
>Mature_190_residues
MKVLTIVAHPREESLTMKVTNRFIEGLQDAGHTVEFIDLYRHEFEAALPVADEPIWDAEEQHFSPEVTKEIERMKSADAL
AFIFPLWWWSMPGIMKGYIDRVWNFGFAYGNSNLHHEHVLWLGLAAADKKKLEKRKYNTMMEHYFNVGLADYCGIPSSTF
HLLTETNKVNSQQLDNWLMQAYELGRNYEK

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Escherichia coli, GI1787129, Length=174, Percent_Identity=32.183908045977, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.2

Molecular weight: Translated: 22229; Mature: 22229

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLTIVAHPREESLTMKVTNRFIEGLQDAGHTVEFIDLYRHEFEAALPVADEPIWDAEE
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QHFSPEVTKEIERMKSADALAFIFPLWWWSMPGIMKGYIDRVWNFGFAYGNSNLHHEHVL
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
WLGLAAADKKKLEKRKYNTMMEHYFNVGLADYCGIPSSTFHLLTETNKVNSQQLDNWLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHH
AYELGRNYEK
HHHHCCCCCC
>Mature Secondary Structure
MKVLTIVAHPREESLTMKVTNRFIEGLQDAGHTVEFIDLYRHEFEAALPVADEPIWDAEE
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QHFSPEVTKEIERMKSADALAFIFPLWWWSMPGIMKGYIDRVWNFGFAYGNSNLHHEHVL
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
WLGLAAADKKKLEKRKYNTMMEHYFNVGLADYCGIPSSTFHLLTETNKVNSQQLDNWLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHH
AYELGRNYEK
HHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; NADPH; H+; acceptor

Specific reaction: NAD(P)H + H+ + acceptor = NAD(P)+ + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 3053170; 7567469 [H]