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The map label for this gene is yxaC [H]

Identifier: 23100586

GI number: 23100586

Start: 3264722

End: 3265411

Strand: Reverse

Name: yxaC [H]

Synonym: OB3131

Alternate gene names: 23100586

Gene position: 3265411-3264722 (Counterclockwise)

Preceding gene: 23100587

Following gene: 23100585

Centisome position: 89.94

GC content: 38.12

Gene sequence:

>690_bases
ATGATTAATTCATTATTGACGATTGTGTTTATCATTGGCACATTGTCTATATATATTTTGTCACGAAAACTAAATAAGAA
ATGGAATCATCCACTGACATTACCTGTATTAGTAAGTTCGGTTGCCATTATTGTTTTCTTACTTATAAGTGAAATTCCCT
ATGAGACATATATGCTTGGAGGAGACTGGATTCACTATTTGTTAGGACCAGCGGTAGTTGCGTTGGCTTACCCGCTCTAT
ATACGACGACAACTGCTGTTAAAATGGTTATACCCGATATTCATGGGCACAATCGCAGGGGCGTTTATTGGGATTCTCTC
TGGAATTATTTTAGCGAAGCTGTTACAAGTAGACGAAACAATCATTTACTCGCTTGTTCCAAAATCAGTTACTACACCAA
TTGCTATCGAGGTAACAAATATTATCGGTGGGCAAGTGTCTTTAACAGCTGTTTTTGTTATTATGGCTGGAATAAGTGGA
GTATTTATGCGAAGCTTCCTTTTTAAAACAATGCGTATAGAACATGTTGTAGGAAGGGGAGTGGGCATTGGCAGTGCATC
CCATGCAATTGGTTCAGCCCATTCATTAGAAATAGATGAGTTGGAGGGTACTTTGGGTACAGTAGCTATGGTAGTTAGTG
CAGTGATTGTATCGATGCTTGCTCCATTACTGGTATCTTTCATTTTTTAA

Upstream 100 bases:

>100_bases
GGCATTTTTTTAATAGCGATTATCATTGTTAGTACAGCGTTAGTGATTGTGATATCTGGACATGTTAGCCAGTGGTTAGT
TAGGAAGAAGGAATTAAAGC

Downstream 100 bases:

>100_bases
TGATTTTGTTTGAAATAGATGAGTAATGGGAACAACACACAATAGAAGATGAATTAGTTAACAAGAAGGAGTTGTTATAC
ATGAATGTACTAGTAATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MINSLLTIVFIIGTLSIYILSRKLNKKWNHPLTLPVLVSSVAIIVFLLISEIPYETYMLGGDWIHYLLGPAVVALAYPLY
IRRQLLLKWLYPIFMGTIAGAFIGILSGIILAKLLQVDETIIYSLVPKSVTTPIAIEVTNIIGGQVSLTAVFVIMAGISG
VFMRSFLFKTMRIEHVVGRGVGIGSASHAIGSAHSLEIDELEGTLGTVAMVVSAVIVSMLAPLLVSFIF

Sequences:

>Translated_229_residues
MINSLLTIVFIIGTLSIYILSRKLNKKWNHPLTLPVLVSSVAIIVFLLISEIPYETYMLGGDWIHYLLGPAVVALAYPLY
IRRQLLLKWLYPIFMGTIAGAFIGILSGIILAKLLQVDETIIYSLVPKSVTTPIAIEVTNIIGGQVSLTAVFVIMAGISG
VFMRSFLFKTMRIEHVVGRGVGIGSASHAIGSAHSLEIDELEGTLGTVAMVVSAVIVSMLAPLLVSFIF
>Mature_229_residues
MINSLLTIVFIIGTLSIYILSRKLNKKWNHPLTLPVLVSSVAIIVFLLISEIPYETYMLGGDWIHYLLGPAVVALAYPLY
IRRQLLLKWLYPIFMGTIAGAFIGILSGIILAKLLQVDETIIYSLVPKSVTTPIAIEVTNIIGGQVSLTAVFVIMAGISG
VFMRSFLFKTMRIEHVVGRGVGIGSASHAIGSAHSLEIDELEGTLGTVAMVVSAVIVSMLAPLLVSFIF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=40.2777777777778, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24828; Mature: 24828

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINSLLTIVFIIGTLSIYILSRKLNKKWNHPLTLPVLVSSVAIIVFLLISEIPYETYMLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEC
GDWIHYLLGPAVVALAYPLYIRRQLLLKWLYPIFMGTIAGAFIGILSGIILAKLLQVDET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIYSLVPKSVTTPIAIEVTNIIGGQVSLTAVFVIMAGISGVFMRSFLFKTMRIEHVVGRG
HHHHHCCHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGIGSASHAIGSAHSLEIDELEGTLGTVAMVVSAVIVSMLAPLLVSFIF
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MINSLLTIVFIIGTLSIYILSRKLNKKWNHPLTLPVLVSSVAIIVFLLISEIPYETYMLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEC
GDWIHYLLGPAVVALAYPLYIRRQLLLKWLYPIFMGTIAGAFIGILSGIILAKLLQVDET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIYSLVPKSVTTPIAIEVTNIIGGQVSLTAVFVIMAGISGVFMRSFLFKTMRIEHVVGRG
HHHHHCCHHCCCCCEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VGIGSASHAIGSAHSLEIDELEGTLGTVAMVVSAVIVSMLAPLLVSFIF
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]