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The map label for this gene is yddH [H]

Identifier: 23100516

GI number: 23100516

Start: 3177997

End: 3178662

Strand: Reverse

Name: yddH [H]

Synonym: OB3061

Alternate gene names: 23100516

Gene position: 3178662-3177997 (Counterclockwise)

Preceding gene: 23100517

Following gene: 23100515

Centisome position: 87.55

GC content: 38.59

Gene sequence:

>666_bases
TTGAATAGAAAGACTTCTAAGAAGTGGAAATATACGACAAAACAACTATTCGGAATTAGTCTTCTACTTATTTTATCATT
AATCGTGTTATCTTGGATTACGAATTACATTGAAAGTCATCATACGAGAGATGCTCCAGGCCCGATGCAAAAAGACGCGC
TACCAGAAATTAGTGAAAACATTTGGGAGTATCACTCGATAGTTAGTAGATACGCCAAACAGAATGGAATAGAAGAACAT
ACACCAGTTATACTTGCGATGATGATGCAGGAATCGGGTGGAAGAGGATTAGACCCAATGCAATCGTCTGAGAGTTTGTG
TGGAGAGCGAAACTGTATAAAAGACCCGGACTTGTCCATACAACAAGGTGTATCATTTTTTGCGCTGGCCTTGGATAAAG
CTAACGGCGATATTGAATTGGCTGTACAAGCGTATAATTTTGGACATGGATTTATCGAGTTTGTACAAGATAGTGGTGGG
GAATACACACAAGAAGCAGCTATAACTTTTTCGCAAAAAATGTATGATCAGTCAGGAAGAGATAATTCCATCTATACGTG
TAGGCGAGAAGAAGCAAAAGAACTGGAAGCATGCTATGGAGATATTTATTATGTATCCTCTGTAATGGATTATAGACTTG
CGATAGAAAGACAGATCGGAAACTGA

Upstream 100 bases:

>100_bases
GGCTACGCTATTATTTTATGGATAATCGGACATCTTATTTACGGATTTTCCATCGGGGTATTTCGACAGCATAGTTACAA
AACATGAAGGAGAATGAAGG

Downstream 100 bases:

>100_bases
TATGATGAAATAAACCATATGTTTGAGGAGGAGAAGAAATGAGAAAAGCAATTCAAACAGAGAAAGCACCAGCTGCTATT
GGACCATACTCTCAAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNRKTSKKWKYTTKQLFGISLLLILSLIVLSWITNYIESHHTRDAPGPMQKDALPEISENIWEYHSIVSRYAKQNGIEEH
TPVILAMMMQESGGRGLDPMQSSESLCGERNCIKDPDLSIQQGVSFFALALDKANGDIELAVQAYNFGHGFIEFVQDSGG
EYTQEAAITFSQKMYDQSGRDNSIYTCRREEAKELEACYGDIYYVSSVMDYRLAIERQIGN

Sequences:

>Translated_221_residues
MNRKTSKKWKYTTKQLFGISLLLILSLIVLSWITNYIESHHTRDAPGPMQKDALPEISENIWEYHSIVSRYAKQNGIEEH
TPVILAMMMQESGGRGLDPMQSSESLCGERNCIKDPDLSIQQGVSFFALALDKANGDIELAVQAYNFGHGFIEFVQDSGG
EYTQEAAITFSQKMYDQSGRDNSIYTCRREEAKELEACYGDIYYVSSVMDYRLAIERQIGN
>Mature_221_residues
MNRKTSKKWKYTTKQLFGISLLLILSLIVLSWITNYIESHHTRDAPGPMQKDALPEISENIWEYHSIVSRYAKQNGIEEH
TPVILAMMMQESGGRGLDPMQSSESLCGERNCIKDPDLSIQQGVSFFALALDKANGDIELAVQAYNFGHGFIEFVQDSGG
EYTQEAAITFSQKMYDQSGRDNSIYTCRREEAKELEACYGDIYYVSSVMDYRLAIERQIGN

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 25092; Mature: 25092

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKTSKKWKYTTKQLFGISLLLILSLIVLSWITNYIESHHTRDAPGPMQKDALPEISEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
IWEYHSIVSRYAKQNGIEEHTPVILAMMMQESGGRGLDPMQSSESLCGERNCIKDPDLSI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
QQGVSFFALALDKANGDIELAVQAYNFGHGFIEFVQDSGGEYTQEAAITFSQKMYDQSGR
HHCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
DNSIYTCRREEAKELEACYGDIYYVSSVMDYRLAIERQIGN
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRKTSKKWKYTTKQLFGISLLLILSLIVLSWITNYIESHHTRDAPGPMQKDALPEISEN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
IWEYHSIVSRYAKQNGIEEHTPVILAMMMQESGGRGLDPMQSSESLCGERNCIKDPDLSI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCH
QQGVSFFALALDKANGDIELAVQAYNFGHGFIEFVQDSGGEYTQEAAITFSQKMYDQSGR
HHCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
DNSIYTCRREEAKELEACYGDIYYVSSVMDYRLAIERQIGN
CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]