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The map label for this gene is ywdK [H]

Identifier: 23100482

GI number: 23100482

Start: 3138093

End: 3138464

Strand: Reverse

Name: ywdK [H]

Synonym: OB3027

Alternate gene names: 23100482

Gene position: 3138464-3138093 (Counterclockwise)

Preceding gene: 23100483

Following gene: 23100477

Centisome position: 86.45

GC content: 37.37

Gene sequence:

>372_bases
ATGAAGTTATTTTTAATAATTGGAGCTATACTAGGGTTTTTAGCAGTTGCTTTAGGTGCATTTGGTGCACATGGGTTAGA
AGGAAGACTCTCTGAAAAAGCAATGAATAACTGGGGAAAAGCAGTAGACTATCAAATGTTTCACACCATTGCAATAATCG
CCGTTGCCCTTTTATTGGCGAGATTTGAAGGAAGTGGATTATTAACAACTAGTGGCTGGATGTTTCTTGTGGGAATTATT
CTTTTTTCAGGAAGTTTATATGTTTATTCTTTTACAAGTATAACGACCTTCGCAATGATTACACCTGTTGGTGGACTTGC
ATTCCTTATTGGTTGGGTGTTACTAGGCGTTGCAGCGATGAGACTATTATAA

Upstream 100 bases:

>100_bases
TACTTCAAAATCAAGCGGATTAAAAAAGAAGAAATCTACTGATGATGATGAAGCGAATGGAGACTCATTATTTGATTTTT
AACATCGGAGGGAAACTAAA

Downstream 100 bases:

>100_bases
TTGAAAGAACATAGATGTAATTAATAAAAATAAAACAAATGCTCGGATAGCCTGTTTCATAGCTTCTGATTGACGTCTTG
TTTGCATTAAAATTATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKLFLIIGAILGFLAVALGAFGAHGLEGRLSEKAMNNWGKAVDYQMFHTIAIIAVALLLARFEGSGLLTTSGWMFLVGII
LFSGSLYVYSFTSITTFAMITPVGGLAFLIGWVLLGVAAMRLL

Sequences:

>Translated_123_residues
MKLFLIIGAILGFLAVALGAFGAHGLEGRLSEKAMNNWGKAVDYQMFHTIAIIAVALLLARFEGSGLLTTSGWMFLVGII
LFSGSLYVYSFTSITTFAMITPVGGLAFLIGWVLLGVAAMRLL
>Mature_123_residues
MKLFLIIGAILGFLAVALGAFGAHGLEGRLSEKAMNNWGKAVDYQMFHTIAIIAVALLLARFEGSGLLTTSGWMFLVGII
LFSGSLYVYSFTSITTFAMITPVGGLAFLIGWVLLGVAAMRLL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=122, Percent_Identity=42.6229508196721, Blast_Score=81, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193203406, Length=114, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13119; Mature: 13119

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLIIGAILGFLAVALGAFGAHGLEGRLSEKAMNNWGKAVDYQMFHTIAIIAVALLLA
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RFEGSGLLTTSGWMFLVGIILFSGSLYVYSFTSITTFAMITPVGGLAFLIGWVLLGVAAM
HHCCCCEEECCCHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RLL
HHC
>Mature Secondary Structure
MKLFLIIGAILGFLAVALGAFGAHGLEGRLSEKAMNNWGKAVDYQMFHTIAIIAVALLLA
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RFEGSGLLTTSGWMFLVGIILFSGSLYVYSFTSITTFAMITPVGGLAFLIGWVLLGVAAM
HHCCCCEEECCCHHHHHHHHHHCCCHHEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RLL
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]