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The map label for this gene is flhO [H]

Identifier: 23100412

GI number: 23100412

Start: 3065025

End: 3065834

Strand: Reverse

Name: flhO [H]

Synonym: OB2957

Alternate gene names: 23100412

Gene position: 3065834-3065025 (Counterclockwise)

Preceding gene: 23100413

Following gene: 23100411

Centisome position: 84.45

GC content: 38.27

Gene sequence:

>810_bases
ATGTTAAGAGGTTTATATACAGCTGCCAGTGGTATGATTACACAACAACGGCAGCAAGAATCACTATCGAATAATATCGC
AAATGCGAATACTCCTGGATATAAAGCAGATCAAACAACTATCCGAGCATTTCCAGAACTATTATTGCAACAGACAGGTT
CCAGTAGTCAAATTCCAACATCACAAGGTGGAATGAACTTCCCGATAAGTCAGACGATTGGTCCGATCAATACGGGGGTC
TATGTTCAAGAAACTGTACCTAACTTTGCTCAAGGTGATGTTCAGGAGACTGGATTATCTACAGACGTAGCAATAATTCA
AGGACAAGTTCCTGATGAAAATGGATTTCTATTCTTTTCTGTTCAAAACGAGAATGGCGAAGAAAGACTCACACGTAATG
GTAATTTTACTGTTGATGGAGAAGGCTTTCTTGTAACCAATCAAGGAAATTATGTTCTTGATGAAGCAGGCAACCCGATT
CAGACAAATGGTTTAGATTATGTTGTAACACCAGAAGGTTTTGTTCAGACAGCAGATGGTACGTTCCCATTAGGTATTCG
CTATGTGGAAGATTCGAATCAGCTTGTAAAAGAAGGAAATGATTTATTTGCAGGAGAATCAATAGATGTACCAGCTGCTG
CGACATTTTCATTGCAACAAGGTGCTTTAGAACAATCAAATGTGAATACCATGCAAACAATGACAGACATGATGAATGCG
TACCGATTATTTGAAACAAACCAACGTGTTTTACGTGCATATGATGAAAGTTTAGGAAAAACAGTAAATGAAATAGGTCG
TCTTGGATAA

Upstream 100 bases:

>100_bases
TTGATAAAGTAGAAAAACGAAATATTAGCTAAACGTTTCGACCGTTCATACCGAAATTAGAAATAAGTATGTACTTTCTA
AATTGACGGGAGAGAATACC

Downstream 100 bases:

>100_bases
GGTTCTGGAGGGATATAAACGATGTCACAAATGATGATACAGGCTGCTGTTACAATGAATCAATTGCAAAATAAGCTTGA
TTTAATTGGTAATAATATGG

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPTSQGGMNFPISQTIGPINTGV
YVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFSVQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPI
QTNGLDYVVTPEGFVQTADGTFPLGIRYVEDSNQLVKEGNDLFAGESIDVPAAATFSLQQGALEQSNVNTMQTMTDMMNA
YRLFETNQRVLRAYDESLGKTVNEIGRLG

Sequences:

>Translated_269_residues
MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPTSQGGMNFPISQTIGPINTGV
YVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFSVQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPI
QTNGLDYVVTPEGFVQTADGTFPLGIRYVEDSNQLVKEGNDLFAGESIDVPAAATFSLQQGALEQSNVNTMQTMTDMMNA
YRLFETNQRVLRAYDESLGKTVNEIGRLG
>Mature_269_residues
MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPTSQGGMNFPISQTIGPINTGV
YVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFSVQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPI
QTNGLDYVVTPEGFVQTADGTFPLGIRYVEDSNQLVKEGNDLFAGESIDVPAAATFSLQQGALEQSNVNTMQTMTDMMNA
YRLFETNQRVLRAYDESLGKTVNEIGRLG

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=277, Percent_Identity=28.158844765343, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787318, Length=280, Percent_Identity=30, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 29189; Mature: 29189

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SQGGMNFPISQTIGPINTGVYVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFS
CCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEE
VQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPIQTNGLDYVVTPEGFVQTADG
EECCCCHHHHHCCCCEEECCCEEEEECCCCEEECCCCCCEECCCCCEEECCCCEEEECCC
TFPLGIRYVEDSNQLVKEGNDLFAGESIDVPAAATFSLQQGALEQSNVNTMQTMTDMMNA
CCCEEEEEECCCCHHHHCCCCEECCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHH
YRLFETNQRVLRAYDESLGKTVNEIGRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRGLYTAASGMITQQRQQESLSNNIANANTPGYKADQTTIRAFPELLLQQTGSSSQIPT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
SQGGMNFPISQTIGPINTGVYVQETVPNFAQGDVQETGLSTDVAIIQGQVPDENGFLFFS
CCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEE
VQNENGEERLTRNGNFTVDGEGFLVTNQGNYVLDEAGNPIQTNGLDYVVTPEGFVQTADG
EECCCCHHHHHCCCCEEECCCEEEEECCCCEEECCCCCCEECCCCCEEECCCCEEEECCC
TFPLGIRYVEDSNQLVKEGNDLFAGESIDVPAAATFSLQQGALEQSNVNTMQTMTDMMNA
CCCEEEEEECCCCHHHHCCCCEECCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHH
YRLFETNQRVLRAYDESLGKTVNEIGRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]